Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 MARS-234ENST00000630571 216 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 MARS-235ENST00000630803 183 ntTSL 3 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.97■□□□□ 0.95
SNX11Q9Y5W9 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.96■□□□□ 0.95
SNX11Q9Y5W9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC20.95■□□□□ 0.95
SNX11Q9Y5W9 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 AC007322.4-201ENST00000509611 723 ntBASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 RNA5SP413-201ENST00000516373 109 ntBASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SNX11Q9Y5W9 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 POU5F1P3-201ENST00000428824 1078 ntBASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 AC093787.1-201ENST00000450396 207 ntBASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 PLLP-204ENST00000569059 665 ntTSL 3 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 OR10C1-204ENST00000622521 1039 ntBASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 AC233723.2-201ENST00000623798 2106 ntBASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 CLDN5-201ENST00000403084 2357 ntBASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC20.94■□□□□ 0.94
SNX11Q9Y5W9 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 AC008687.6-201ENST00000596318 630 ntBASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 AC016405.3-201ENST00000607710 860 ntBASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
SNX11Q9Y5W9 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 AC008694.1-202ENST00000636953 945 ntBASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SNX11Q9Y5W9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
SNX11Q9Y5W9 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.91■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms