Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC32.9■■■□□ 2.86
CDK11AQ9UQ88 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 AC061975.6-201ENST00000579045 1553 ntBASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 AC098590.1-201ENST00000468126 897 ntBASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC32.89■■■□□ 2.86
CDK11AQ9UQ88 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC32.89■■■□□ 2.85
CDK11AQ9UQ88 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC32.88■■■□□ 2.85
CDK11AQ9UQ88 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 RPS2P52-201ENST00000469610 820 ntBASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC32.87■■■□□ 2.85
CDK11AQ9UQ88 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 GCSHP5-201ENST00000443090 522 ntBASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC32.86■■■□□ 2.85
CDK11AQ9UQ88 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 MMAB-206ENST00000540016 945 ntTSL 3 BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC32.85■■■□□ 2.85
CDK11AQ9UQ88 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 INO80E-214ENST00000620599 515 ntTSL 2 BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC32.84■■■□□ 2.85
CDK11AQ9UQ88 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 AP006294.2-201ENST00000641667 209 ntBASIC32.83■■■□□ 2.85
CDK11AQ9UQ88 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC32.82■■■□□ 2.84
CDK11AQ9UQ88 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC32.82■■■□□ 2.84
CDK11AQ9UQ88 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC32.82■■■□□ 2.84
CDK11AQ9UQ88 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC32.82■■■□□ 2.84
CDK11AQ9UQ88 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 SERPINH1P1-201ENST00000419794 1249 ntBASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC32.81■■■□□ 2.84
CDK11AQ9UQ88 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 AC006058.3-201ENST00000606217 1069 ntBASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC32.8■■■□□ 2.84
CDK11AQ9UQ88 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 AC003102.1-202ENST00000563394 1796 ntBASIC32.79■■■□□ 2.84
CDK11AQ9UQ88 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC32.79■■■□□ 2.84
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms