Protein–RNA interactions for Protein: Q9UNS2

COPS3, COP9 signalosome complex subunit 3, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3Q9UNS2 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.8■□□□□ 0.6
COPS3Q9UNS2 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 AL049796.1-201ENST00000565336 1766 ntBASIC18.79■□□□□ 0.6
COPS3Q9UNS2 SLC47A1P1-202ENST00000449666 945 ntBASIC18.79■□□□□ 0.6
COPS3Q9UNS2 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 MIR4466-201ENST00000606121 54 ntBASIC18.79■□□□□ 0.6
COPS3Q9UNS2 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
COPS3Q9UNS2 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 SYT6-210ENST00000641643 1587 ntBASIC18.78■□□□□ 0.6
COPS3Q9UNS2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
COPS3Q9UNS2 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 AL138724.1-201ENST00000606771 1088 ntBASIC18.77■□□□□ 0.6
COPS3Q9UNS2 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC18.77■□□□□ 0.6
COPS3Q9UNS2 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPS3Q9UNS2 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
COPS3Q9UNS2 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 RPP21-222ENST00000433076 577 ntTSL 2 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 AC136469.2-201ENST00000623944 1028 ntBASIC18.76■□□□□ 0.59
COPS3Q9UNS2 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.76■□□□□ 0.59
COPS3Q9UNS2 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 AP005435.1-201ENST00000529293 1178 ntBASIC18.75■□□□□ 0.59
COPS3Q9UNS2 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
COPS3Q9UNS2 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms