Protein–RNA interactions for Protein: Q9NYL5

CYP39A1, 24-hydroxycholesterol 7-alpha-hydroxylase, humanhuman

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP39A1Q9NYL5 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 AC098934.4-201ENST00000564127 592 ntBASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 MARS-234ENST00000630571 216 ntTSL 5 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 MARS-235ENST00000630803 183 ntTSL 3 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC24.12■■□□□ 1.45
CYP39A1Q9NYL5 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 AC073210.2-201ENST00000430369 194 ntBASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 KRT18P6-201ENST00000555540 1265 ntBASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
CYP39A1Q9NYL5 RBM17P2-201ENST00000616397 1405 ntBASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 ME2-208ENST00000638937 2471 ntTSL 5 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 RGMA-211ENST00000557420 989 ntTSL 3 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 FGF8-207ENST00000618991 856 ntTSL 3 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 OR10C1-204ENST00000622521 1039 ntBASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC24.1■■□□□ 1.45
CYP39A1Q9NYL5 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 AC133041.1-202ENST00000642053 222 ntBASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 AC026471.6-201ENST00000622954 1905 ntBASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC24.09■■□□□ 1.45
CYP39A1Q9NYL5 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 AC093787.1-201ENST00000450396 207 ntBASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CYP39A1Q9NYL5 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
CYP39A1Q9NYL5 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC24.08■■□□□ 1.44
CYP39A1Q9NYL5 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 MKRN4P-201ENST00000444706 1521 ntBASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 AC016405.3-201ENST00000607710 860 ntBASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC24.07■■□□□ 1.44
CYP39A1Q9NYL5 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 MIPEPP3-201ENST00000412105 444 ntBASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 AL512625.2-201ENST00000417533 625 ntBASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 AC069236.1-201ENST00000604339 616 ntBASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CYP39A1Q9NYL5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 PHB2-213ENST00000546111 858 ntTSL 2 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 AC243732.1-201ENST00000612648 864 ntBASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 AC008694.1-202ENST00000636953 945 ntBASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC24.05■■□□□ 1.44
CYP39A1Q9NYL5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CYP39A1Q9NYL5 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CYP39A1Q9NYL5 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC24.04■■□□□ 1.44
CYP39A1Q9NYL5 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CYP39A1Q9NYL5 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms