Protein–RNA interactions for Protein: Q9NSI6

BRWD1, Bromodomain and WD repeat-containing protein 1, humanhuman

Predictions only

Length 2,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRWD1Q9NSI6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC22.26■■□□□ 1.15
BRWD1Q9NSI6 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
BRWD1Q9NSI6 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
BRWD1Q9NSI6 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.26■■□□□ 1.15
BRWD1Q9NSI6 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 PNMA6B-201ENST00000538162 1200 ntBASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
BRWD1Q9NSI6 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
BRWD1Q9NSI6 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 RCN1P1-201ENST00000400413 996 ntBASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 AL591742.1-201ENST00000604433 565 ntBASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 LINC00526-201ENST00000581067 1875 ntBASIC22.23■■□□□ 1.15
BRWD1Q9NSI6 OR7E47P-201ENST00000546390 1422 ntBASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 DENND1B-204ENST00000367396 2177 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 RN7SL850P-201ENST00000579959 291 ntBASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.22■■□□□ 1.15
BRWD1Q9NSI6 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
BRWD1Q9NSI6 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.2■■□□□ 1.15
BRWD1Q9NSI6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 AC097493.4-201ENST00000641197 219 ntBASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
BRWD1Q9NSI6 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
BRWD1Q9NSI6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms