Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
PCDHB16Q9NRJ7 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB16Q9NRJ7 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.51
PCDHB16Q9NRJ7 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.27■□□□□ 0.51
PCDHB16Q9NRJ7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
PCDHB16Q9NRJ7 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
PCDHB16Q9NRJ7 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.25■□□□□ 0.51
PCDHB16Q9NRJ7 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 OXCT2P1-201ENST00000447263 1535 ntBASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 WDR86-AS1-204ENST00000489632 751 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
PCDHB16Q9NRJ7 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 Z98882.1-201ENST00000622160 2253 ntBASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
PCDHB16Q9NRJ7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
PCDHB16Q9NRJ7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms