Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 MIR939-201ENST00000401314 82 ntBASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 AL024507.2-201ENST00000606070 2574 ntBASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
NEUROD4Q9HD90 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 HYI-206ENST00000372434 1025 ntTSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 SUDS3P1-201ENST00000505831 966 ntBASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 AP006621.1-201ENST00000532946 536 ntTSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 AF213884.3-201ENST00000563833 479 ntBASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
NEUROD4Q9HD90 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 MIR572-201ENST00000384983 95 ntBASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 AF106564.1-201ENST00000607058 2553 ntBASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
NEUROD4Q9HD90 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 AC055733.4-201ENST00000638462 1354 ntBASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
NEUROD4Q9HD90 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms