Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.31■□□□□ 0.84
LRTM1Q9HBL6 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
LRTM1Q9HBL6 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 AL049796.1-201ENST00000565336 1766 ntBASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LRTM1Q9HBL6 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 AC008764.7-201ENST00000593779 1081 ntBASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LRTM1Q9HBL6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LRTM1Q9HBL6 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
LRTM1Q9HBL6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 AC008406.3-201ENST00000620001 1374 ntBASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC20.26■□□□□ 0.83
LRTM1Q9HBL6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC20.25■□□□□ 0.83
LRTM1Q9HBL6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms