Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
CHMP4BQ9H444 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 NARF-205ENST00000412079 1760 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
CHMP4BQ9H444 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 FEM1AP4-201ENST00000443167 1987 ntBASIC26.66■■□□□ 1.86
CHMP4BQ9H444 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
CHMP4BQ9H444 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 STOX2-205ENST00000513034 807 ntTSL 3 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 STX5-203ENST00000394690 1568 ntTSL 5 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
CHMP4BQ9H444 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC26.64■■□□□ 1.86
CHMP4BQ9H444 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
CHMP4BQ9H444 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHMP4BQ9H444 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
CHMP4BQ9H444 AC027612.3-201ENST00000413684 1047 ntBASIC26.64■■□□□ 1.86
CHMP4BQ9H444 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
CHMP4BQ9H444 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CHMP4BQ9H444 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
CHMP4BQ9H444 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
CHMP4BQ9H444 DYM-203ENST00000442713 2147 ntTSL 2 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 AK1-201ENST00000223836 736 ntTSL 3 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 RNF146-206ENST00000480444 843 ntTSL 2 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 MFF-207ENST00000409565 1548 ntTSL 2 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
CHMP4BQ9H444 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 AC053503.5-201ENST00000601508 636 ntBASIC26.62■■□□□ 1.85
CHMP4BQ9H444 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
CHMP4BQ9H444 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC26.61■■□□□ 1.85
CHMP4BQ9H444 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 11.9 ms