Protein–RNA interactions for Protein: Q9H3Q1

CDC42EP4, Cdc42 effector protein 4, humanhuman

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4Q9H3Q1 AP004607.7-201ENST00000527152 1677 ntBASIC21.52■■□□□ 1.04
CDC42EP4Q9H3Q1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42EP4Q9H3Q1 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42EP4Q9H3Q1 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CDC42EP4Q9H3Q1 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC21.52■■□□□ 1.04
CDC42EP4Q9H3Q1 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
CDC42EP4Q9H3Q1 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.52■■□□□ 1.03
CDC42EP4Q9H3Q1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 AP005212.1-201ENST00000581547 1997 ntBASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 RARRES2P1-201ENST00000474487 481 ntBASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 GABARAPL3-202ENST00000624044 1851 ntBASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 AC073314.1-201ENST00000568729 2216 ntBASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CDC42EP4Q9H3Q1 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 GATM-206ENST00000558336 1522 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 AC006128.1-201ENST00000624704 1661 ntBASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CDC42EP4Q9H3Q1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CDC42EP4Q9H3Q1 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.48■■□□□ 1.03
CDC42EP4Q9H3Q1 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 PLK5-205ENST00000642079 1969 ntBASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CDC42EP4Q9H3Q1 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CDC42EP4Q9H3Q1 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms