Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 AFG3L1P-217ENST00000557444 2447 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 OR2I1P-207ENST00000453522 948 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 MIR6724-1-201ENST00000616420 92 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 MIR6724-2-201ENST00000616483 92 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 MIR6724-4-201ENST00000617390 92 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 MIR6724-3-201ENST00000622482 92 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 PCDHAC2-203ENST00000615316 3011 ntBASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
KRTAP3-1Q9BYR8 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 ERF-202ENST00000440177 2032 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 UNC93B8-201ENST00000511903 705 ntBASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 AP004607.7-201ENST00000527152 1677 ntBASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 LINC01551-203ENST00000550266 455 ntTSL 3 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC10.71□□□□□ -0.69
KRTAP3-1Q9BYR8 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
KRTAP3-1Q9BYR8 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 ME2-218ENST00000640965 2476 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC10.7□□□□□ -0.7
KRTAP3-1Q9BYR8 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms