Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 AC087393.1-201ENST00000582896 145 ntBASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 AC133552.2-201ENST00000619106 1032 ntBASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 LINC01529-204ENST00000636474 1715 ntBASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LCE3DQ9BYE3 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 FEM1AP1-201ENST00000431297 1995 ntBASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 CEP120-209ENST00000515110 606 ntTSL 3 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 AC009086.3-201ENST00000623486 1008 ntBASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
LCE3DQ9BYE3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms