Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
CCL13Q99616 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.72■□□□□ 0.43
CCL13Q99616 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL13Q99616 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
CCL13Q99616 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC17.72■□□□□ 0.43
CCL13Q99616 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC17.72■□□□□ 0.43
CCL13Q99616 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 ANKRD20A6P-201ENST00000618763 204 ntBASIC17.72■□□□□ 0.43
CCL13Q99616 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
CCL13Q99616 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CCL13Q99616 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CCL13Q99616 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
CCL13Q99616 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC17.71■□□□□ 0.43
CCL13Q99616 NTF6G-201ENST00000591094 616 ntBASIC17.71■□□□□ 0.43
CCL13Q99616 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CCL13Q99616 AC004854.2-201ENST00000608450 1441 ntBASIC17.71■□□□□ 0.43
CCL13Q99616 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.71■□□□□ 0.43
CCL13Q99616 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC17.71■□□□□ 0.42
CCL13Q99616 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC17.71■□□□□ 0.42
CCL13Q99616 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.42
CCL13Q99616 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.42
CCL13Q99616 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC17.7■□□□□ 0.42
CCL13Q99616 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL13Q99616 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CCL13Q99616 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 TESC-206ENST00000541210 936 ntTSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.7■□□□□ 0.42
CCL13Q99616 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC17.7■□□□□ 0.42
CCL13Q99616 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCL13Q99616 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCL13Q99616 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCL13Q99616 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC17.69■□□□□ 0.42
CCL13Q99616 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.69■□□□□ 0.42
CCL13Q99616 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC17.69■□□□□ 0.42
CCL13Q99616 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL13Q99616 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC17.69■□□□□ 0.42
CCL13Q99616 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC17.69■□□□□ 0.42
CCL13Q99616 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC17.69■□□□□ 0.42
CCL13Q99616 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 AP004607.4-201ENST00000530158 1459 ntBASIC17.69■□□□□ 0.42
CCL13Q99616 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCL13Q99616 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCL13Q99616 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCL13Q99616 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL13Q99616 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL13Q99616 AL162430.1-201ENST00000480705 870 ntBASIC17.68■□□□□ 0.42
CCL13Q99616 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC17.68■□□□□ 0.42
CCL13Q99616 GALNS-213ENST00000569433 723 ntTSL 3 BASIC17.68■□□□□ 0.42
CCL13Q99616 AC104187.1-201ENST00000607510 612 ntBASIC17.68■□□□□ 0.42
CCL13Q99616 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
CCL13Q99616 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC17.68■□□□□ 0.42
CCL13Q99616 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCL13Q99616 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.67■□□□□ 0.42
CCL13Q99616 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCL13Q99616 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC17.67■□□□□ 0.42
CCL13Q99616 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms