Protein–RNA interactions for Protein: Q96QU1

PCDH15, Protocadherin-15, humanhuman

Predictions only

Length 1,955 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15Q96QU1 AC008175.2-201ENST00000612840 297 ntBASIC20.79■□□□□ 0.92
PCDH15Q96QU1 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.79■□□□□ 0.92
PCDH15Q96QU1 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 KLHL36-201ENST00000258157 1974 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
PCDH15Q96QU1 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 A1BG-201ENST00000263100 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
PCDH15Q96QU1 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 POU5F1P4-201ENST00000413175 1085 ntBASIC20.77■□□□□ 0.92
PCDH15Q96QU1 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 AC120498.10-201ENST00000621827 505 ntBASIC20.77■□□□□ 0.92
PCDH15Q96QU1 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 CD44-222ENST00000526025 1052 ntTSL 2 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 AC243732.1-201ENST00000612648 864 ntBASIC20.77■□□□□ 0.92
PCDH15Q96QU1 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.77■□□□□ 0.92
PCDH15Q96QU1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.76■□□□□ 0.91
PCDH15Q96QU1 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 RHOD-202ENST00000532559 538 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC20.76■□□□□ 0.91
PCDH15Q96QU1 AC008403.3-201ENST00000598924 454 ntBASIC20.76■□□□□ 0.91
PCDH15Q96QU1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 GCA-201ENST00000233612 1694 ntTSL 2 BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 AC087742.1-201ENST00000575880 1738 ntBASIC20.75■□□□□ 0.91
PCDH15Q96QU1 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
PCDH15Q96QU1 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PCDH15Q96QU1 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC20.74■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms