Protein–RNA interactions for Protein: Q96NR8

RDH12, Retinol dehydrogenase 12, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH12Q96NR8 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH12Q96NR8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC19.43■□□□□ 0.7
RDH12Q96NR8 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC19.43■□□□□ 0.7
RDH12Q96NR8 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
RDH12Q96NR8 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH12Q96NR8 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH12Q96NR8 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.43■□□□□ 0.7
RDH12Q96NR8 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH12Q96NR8 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RDH12Q96NR8 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
RDH12Q96NR8 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 CLTA-206ENST00000466396 695 ntTSL 2 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 MIR4508-201ENST00000584178 70 ntBASIC19.42■□□□□ 0.7
RDH12Q96NR8 AC068587.7-201ENST00000641602 218 ntBASIC19.42■□□□□ 0.7
RDH12Q96NR8 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RDH12Q96NR8 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.42■□□□□ 0.7
RDH12Q96NR8 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 PLK5-205ENST00000642079 1969 ntBASIC19.41■□□□□ 0.7
RDH12Q96NR8 AFG3L1P-217ENST00000557444 2447 ntBASIC19.41■□□□□ 0.7
RDH12Q96NR8 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 AL034346.1-201ENST00000568244 1277 ntBASIC19.41■□□□□ 0.7
RDH12Q96NR8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
RDH12Q96NR8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC19.41■□□□□ 0.7
RDH12Q96NR8 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC19.4■□□□□ 0.7
RDH12Q96NR8 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RDH12Q96NR8 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RDH12Q96NR8 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.39■□□□□ 0.7
RDH12Q96NR8 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC19.39■□□□□ 0.7
RDH12Q96NR8 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
RDH12Q96NR8 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC19.39■□□□□ 0.69
RDH12Q96NR8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.39■□□□□ 0.69
RDH12Q96NR8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
RDH12Q96NR8 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
RDH12Q96NR8 AC020907.5-201ENST00000624372 1936 ntBASIC19.39■□□□□ 0.69
RDH12Q96NR8 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RDH12Q96NR8 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.38■□□□□ 0.69
RDH12Q96NR8 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.38■□□□□ 0.69
RDH12Q96NR8 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
RDH12Q96NR8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.38■□□□□ 0.69
RDH12Q96NR8 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms