Protein–RNA interactions for Protein: Q96KF2

PRAC1, Small nuclear protein PRAC1, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAC1Q96KF2 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 AP000974.1-201ENST00000623909 2387 ntBASIC10.38□□□□□ -0.75
PRAC1Q96KF2 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ANKRD26P3-201ENST00000454044 2748 ntBASIC10.38□□□□□ -0.75
PRAC1Q96KF2 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 MST1L-201ENST00000442552 2185 ntBASIC10.38□□□□□ -0.75
PRAC1Q96KF2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 HR-201ENST00000312841 5351 ntTSL 5 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 LTF-203ENST00000426532 2494 ntTSL 2 BASIC10.38□□□□□ -0.75
PRAC1Q96KF2 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 AL049812.1-201ENST00000432563 2267 ntBASIC10.37□□□□□ -0.75
PRAC1Q96KF2 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC10.37□□□□□ -0.75
PRAC1Q96KF2 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 AL596257.1-201ENST00000641463 2694 ntBASIC10.36□□□□□ -0.75
PRAC1Q96KF2 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
PRAC1Q96KF2 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms