Protein–RNA interactions for Protein: Q96H20

SNF8, Vacuolar-sorting protein SNF8, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8Q96H20 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC21.72■■□□□ 1.07
SNF8Q96H20 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
SNF8Q96H20 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
SNF8Q96H20 AL356441.2-201ENST00000443009 864 ntBASIC21.71■■□□□ 1.07
SNF8Q96H20 QDPR-206ENST00000508623 601 ntTSL 3 BASIC21.71■■□□□ 1.07
SNF8Q96H20 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC21.71■■□□□ 1.07
SNF8Q96H20 AL512631.2-201ENST00000604634 923 ntBASIC21.71■■□□□ 1.07
SNF8Q96H20 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC21.71■■□□□ 1.07
SNF8Q96H20 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SNF8Q96H20 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
SNF8Q96H20 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SNF8Q96H20 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC21.69■■□□□ 1.06
SNF8Q96H20 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.69■■□□□ 1.06
SNF8Q96H20 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.69■■□□□ 1.06
SNF8Q96H20 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.69■■□□□ 1.06
SNF8Q96H20 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SNF8Q96H20 AP005435.1-201ENST00000529293 1178 ntBASIC21.69■■□□□ 1.06
SNF8Q96H20 AL138724.1-201ENST00000606771 1088 ntBASIC21.69■■□□□ 1.06
SNF8Q96H20 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 AP006587.3-201ENST00000525742 1516 ntBASIC21.69■■□□□ 1.06
SNF8Q96H20 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC21.69■■□□□ 1.06
SNF8Q96H20 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SNF8Q96H20 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.68■■□□□ 1.06
SNF8Q96H20 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC21.68■■□□□ 1.06
SNF8Q96H20 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.68■■□□□ 1.06
SNF8Q96H20 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC21.68■■□□□ 1.06
SNF8Q96H20 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
SNF8Q96H20 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC21.68■■□□□ 1.06
SNF8Q96H20 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
SNF8Q96H20 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.68■■□□□ 1.06
SNF8Q96H20 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SNF8Q96H20 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
SNF8Q96H20 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC21.67■■□□□ 1.06
SNF8Q96H20 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
SNF8Q96H20 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.67■■□□□ 1.06
SNF8Q96H20 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC21.67■■□□□ 1.06
SNF8Q96H20 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 SERBP1P1-201ENST00000396021 1160 ntBASIC21.67■■□□□ 1.06
SNF8Q96H20 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC21.67■■□□□ 1.06
SNF8Q96H20 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC21.67■■□□□ 1.06
SNF8Q96H20 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC21.67■■□□□ 1.06
SNF8Q96H20 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SNF8Q96H20 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SNF8Q96H20 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SNF8Q96H20 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC21.66■■□□□ 1.06
SNF8Q96H20 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC21.66■■□□□ 1.06
SNF8Q96H20 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
SNF8Q96H20 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SNF8Q96H20 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SNF8Q96H20 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SNF8Q96H20 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SNF8Q96H20 SYT6-210ENST00000641643 1587 ntBASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms