Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 AC231657.2-201ENST00000624556 255 ntBASIC17.76■□□□□ 0.43
TIMD4Q96H15 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 LTK-203ENST00000453182 2412 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 CDCA4P2-201ENST00000441182 718 ntBASIC17.75■□□□□ 0.43
TIMD4Q96H15 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 BRI3-207ENST00000539286 699 ntTSL 2 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 MFSD11-216ENST00000590393 1141 ntBASIC17.75■□□□□ 0.43
TIMD4Q96H15 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
TIMD4Q96H15 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 AC080038.3-201ENST00000623346 1952 ntBASIC17.75■□□□□ 0.43
TIMD4Q96H15 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TIMD4Q96H15 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 DONSON-202ENST00000303113 2028 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 TFG-210ENST00000620299 1289 ntTSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 CCDC9-201ENST00000221922 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
TIMD4Q96H15 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
TIMD4Q96H15 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 SLC7A5P1-201ENST00000568957 537 ntBASIC17.73■□□□□ 0.43
TIMD4Q96H15 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
TIMD4Q96H15 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
TIMD4Q96H15 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 ID1-201ENST00000376105 1233 ntBASIC17.72■□□□□ 0.43
TIMD4Q96H15 AC007322.1-201ENST00000426983 750 ntBASIC17.72■□□□□ 0.43
TIMD4Q96H15 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC17.72■□□□□ 0.43
TIMD4Q96H15 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
TIMD4Q96H15 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
TIMD4Q96H15 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC17.71■□□□□ 0.43
TIMD4Q96H15 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms