Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB1Q8WWH5 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
TRUB1Q8WWH5 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 AC092028.1-203ENST00000608262 953 ntBASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
TRUB1Q8WWH5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.32■□□□□ 0.68
TRUB1Q8WWH5 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 AC068587.7-201ENST00000641602 218 ntBASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 KRT8P33-201ENST00000508125 1423 ntBASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.31■□□□□ 0.68
TRUB1Q8WWH5 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 AL049796.1-201ENST00000565336 1766 ntBASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
TRUB1Q8WWH5 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 PDLIM3-203ENST00000284771 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TRUB1Q8WWH5 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TRUB1Q8WWH5 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms