Protein–RNA interactions for Protein: Q8WTU2

SSC4D, Scavenger receptor cysteine-rich domain-containing group B protein, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSC4DQ8WTU2 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
SSC4DQ8WTU2 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 OXCT2P1-201ENST00000447263 1535 ntBASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 AC242852.2-201ENST00000615738 1807 ntBASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 AC009237.3-201ENST00000393279 1427 ntBASIC19.17■□□□□ 0.66
SSC4DQ8WTU2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 UNC93B4-201ENST00000505679 747 ntBASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 AC006058.3-201ENST00000606217 1069 ntBASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 AC092118.2-201ENST00000613495 667 ntBASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SSC4DQ8WTU2 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 AC013268.1-206ENST00000638368 961 ntBASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 AC112229.1-201ENST00000639295 961 ntBASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
SSC4DQ8WTU2 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSC4DQ8WTU2 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SSC4DQ8WTU2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 MIR1224-201ENST00000408193 85 ntBASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 MARS-234ENST00000630571 216 ntTSL 5 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 MARS-235ENST00000630803 183 ntTSL 3 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 H1FX-201ENST00000333762 1507 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
SSC4DQ8WTU2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 CYP2T1P-201ENST00000432607 1285 ntBASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 AC128676.1-201ENST00000454392 318 ntBASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 AC004687.1-201ENST00000579003 1625 ntBASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
SSC4DQ8WTU2 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SSC4DQ8WTU2 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC19.12■□□□□ 0.65
SSC4DQ8WTU2 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 17.2 ms