Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
RAB3IL1Q8TBN0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 AC241377.3-202ENST00000626088 1088 ntBASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 AC241585.3-202ENST00000628937 1088 ntBASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 AC245100.8-202ENST00000629247 1058 ntBASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
RAB3IL1Q8TBN0 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 GTSE1-AS1-202ENST00000623117 1518 ntBASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
RAB3IL1Q8TBN0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 AC133637.1-201ENST00000624115 1537 ntBASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC20.97■□□□□ 0.95
RAB3IL1Q8TBN0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 HES6-204ENST00000409182 863 ntTSL 2 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
RAB3IL1Q8TBN0 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RAB3IL1Q8TBN0 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC20.95■□□□□ 0.95
RAB3IL1Q8TBN0 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
RAB3IL1Q8TBN0 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 ADM-207ENST00000530439 1839 ntTSL 2 BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RAB3IL1Q8TBN0 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
RAB3IL1Q8TBN0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms