Protein–RNA interactions for Protein: Q6QNY0

BLOC1S3, Biogenesis of lysosome-related organelles complex 1 subunit 3, humanhuman

Predictions only

Length 202 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S3Q6QNY0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 AP006587.3-201ENST00000525742 1516 ntBASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
BLOC1S3Q6QNY0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 AL138724.1-201ENST00000606771 1088 ntBASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 AC079416.2-201ENST00000625035 1193 ntBASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
BLOC1S3Q6QNY0 AC092667.1-201ENST00000434301 2586 ntBASIC20.14■□□□□ 0.82
BLOC1S3Q6QNY0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.82
BLOC1S3Q6QNY0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.14■□□□□ 0.82
BLOC1S3Q6QNY0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 PTCHD3P2-201ENST00000424937 1205 ntBASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
BLOC1S3Q6QNY0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 AC006128.1-201ENST00000624704 1661 ntBASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
BLOC1S3Q6QNY0 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 GABARAPL3-202ENST00000624044 1851 ntBASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 SERBP1P1-201ENST00000396021 1160 ntBASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 AP005212.1-201ENST00000581547 1997 ntBASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 PLK5-205ENST00000642079 1969 ntBASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
BLOC1S3Q6QNY0 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
BLOC1S3Q6QNY0 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S3Q6QNY0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
BLOC1S3Q6QNY0 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.1■□□□□ 0.81
BLOC1S3Q6QNY0 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms