Protein–RNA interactions for Protein: Q5VV42

CDKAL1, Threonylcarbamoyladenosine tRNA methylthiotransferase, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKAL1Q5VV42 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 PXK-203ENST00000383715 1756 ntTSL 5 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.19■■□□□ 1.3
CDKAL1Q5VV42 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC23.18■■□□□ 1.3
CDKAL1Q5VV42 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
CDKAL1Q5VV42 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
CDKAL1Q5VV42 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 AL136116.3-201ENST00000402907 1138 ntBASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 AC233992.3-201ENST00000607491 485 ntBASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
CDKAL1Q5VV42 PLK5-205ENST00000642079 1969 ntBASIC23.14■■□□□ 1.3
CDKAL1Q5VV42 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.3
CDKAL1Q5VV42 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDKAL1Q5VV42 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
CDKAL1Q5VV42 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
CDKAL1Q5VV42 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 UNC93B3-201ENST00000308076 687 ntBASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 AC055733.4-201ENST00000638462 1354 ntBASIC23.14■■□□□ 1.29
CDKAL1Q5VV42 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC23.13■■□□□ 1.29
CDKAL1Q5VV42 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms