Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 YBX1P1-201ENST00000445822 960 ntBASIC18.54■□□□□ 0.56
FAM27BQ5VT28 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 EEF1DP3-203ENST00000566025 782 ntBASIC18.54■□□□□ 0.56
FAM27BQ5VT28 AC053503.5-201ENST00000601508 636 ntBASIC18.54■□□□□ 0.56
FAM27BQ5VT28 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
FAM27BQ5VT28 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 AC079140.4-201ENST00000507448 529 ntBASIC18.53■□□□□ 0.56
FAM27BQ5VT28 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 SP2-202ENST00000613139 908 ntTSL 5 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 DYM-203ENST00000442713 2147 ntTSL 2 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
FAM27BQ5VT28 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 STX5-203ENST00000394690 1568 ntTSL 5 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
FAM27BQ5VT28 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.52■□□□□ 0.55
FAM27BQ5VT28 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 FEM1AP4-201ENST00000443167 1987 ntBASIC18.51■□□□□ 0.55
FAM27BQ5VT28 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 KRT87P-202ENST00000534226 1464 ntBASIC18.51■□□□□ 0.55
FAM27BQ5VT28 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
FAM27BQ5VT28 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 TERF1P2-201ENST00000583350 1212 ntBASIC18.5■□□□□ 0.55
FAM27BQ5VT28 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.5■□□□□ 0.55
FAM27BQ5VT28 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
FAM27BQ5VT28 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms