Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC19.68■□□□□ 0.74
SYPL1Q16563 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.68■□□□□ 0.74
SYPL1Q16563 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC19.68■□□□□ 0.74
SYPL1Q16563 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.68■□□□□ 0.74
SYPL1Q16563 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYPL1Q16563 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.68■□□□□ 0.74
SYPL1Q16563 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.67■□□□□ 0.74
SYPL1Q16563 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SYPL1Q16563 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.67■□□□□ 0.74
SYPL1Q16563 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.67■□□□□ 0.74
SYPL1Q16563 AF213884.3-201ENST00000563833 479 ntBASIC19.67■□□□□ 0.74
SYPL1Q16563 AL355001.2-201ENST00000620617 1191 ntBASIC19.67■□□□□ 0.74
SYPL1Q16563 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYPL1Q16563 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYPL1Q16563 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC19.67■□□□□ 0.74
SYPL1Q16563 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYPL1Q16563 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
SYPL1Q16563 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYPL1Q16563 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYPL1Q16563 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 MIR939-201ENST00000401314 82 ntBASIC19.66■□□□□ 0.74
SYPL1Q16563 NALT1-201ENST00000429224 738 ntTSL 5 BASIC19.66■□□□□ 0.74
SYPL1Q16563 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.66■□□□□ 0.74
SYPL1Q16563 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.66■□□□□ 0.74
SYPL1Q16563 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SYPL1Q16563 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.66■□□□□ 0.74
SYPL1Q16563 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SYPL1Q16563 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.66■□□□□ 0.74
SYPL1Q16563 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYPL1Q16563 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
SYPL1Q16563 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYPL1Q16563 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
SYPL1Q16563 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC19.65■□□□□ 0.74
SYPL1Q16563 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.65■□□□□ 0.74
SYPL1Q16563 AL031432.3-201ENST00000607698 485 ntBASIC19.65■□□□□ 0.74
SYPL1Q16563 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 RASA4CP-201ENST00000424092 1398 ntBASIC19.65■□□□□ 0.74
SYPL1Q16563 AC009237.3-201ENST00000393279 1427 ntBASIC19.65■□□□□ 0.74
SYPL1Q16563 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYPL1Q16563 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYPL1Q16563 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.74
SYPL1Q16563 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.64■□□□□ 0.74
SYPL1Q16563 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYPL1Q16563 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.64■□□□□ 0.73
SYPL1Q16563 AL136967.2-201ENST00000623968 743 ntBASIC19.64■□□□□ 0.73
SYPL1Q16563 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.64■□□□□ 0.73
SYPL1Q16563 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
SYPL1Q16563 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.64■□□□□ 0.73
SYPL1Q16563 AC055733.4-201ENST00000638462 1354 ntBASIC19.64■□□□□ 0.73
SYPL1Q16563 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYPL1Q16563 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC19.64■□□□□ 0.73
SYPL1Q16563 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.64■□□□□ 0.73
SYPL1Q16563 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYPL1Q16563 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.64■□□□□ 0.73
SYPL1Q16563 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 AL049796.1-201ENST00000565336 1766 ntBASIC19.63■□□□□ 0.73
SYPL1Q16563 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 PARN-205ENST00000539279 1557 ntTSL 2 BASIC19.63■□□□□ 0.73
SYPL1Q16563 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SYPL1Q16563 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.63■□□□□ 0.73
SYPL1Q16563 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.63■□□□□ 0.73
SYPL1Q16563 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SYPL1Q16563 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.63■□□□□ 0.73
SYPL1Q16563 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.62■□□□□ 0.73
SYPL1Q16563 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC19.62■□□□□ 0.73
SYPL1Q16563 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.62■□□□□ 0.73
SYPL1Q16563 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYPL1Q16563 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SYPL1Q16563 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms