Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC20.41■□□□□ 0.86
PCDH1Q08174 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH1Q08174 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH1Q08174 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.41■□□□□ 0.86
PCDH1Q08174 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
PCDH1Q08174 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.41■□□□□ 0.86
PCDH1Q08174 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
PCDH1Q08174 IRS3P-201ENST00000223076 1006 ntBASIC20.4■□□□□ 0.86
PCDH1Q08174 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDH1Q08174 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH1Q08174 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC20.4■□□□□ 0.86
PCDH1Q08174 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
PCDH1Q08174 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
PCDH1Q08174 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC20.4■□□□□ 0.86
PCDH1Q08174 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH1Q08174 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC20.4■□□□□ 0.86
PCDH1Q08174 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
PCDH1Q08174 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
PCDH1Q08174 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH1Q08174 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDH1Q08174 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC20.39■□□□□ 0.86
PCDH1Q08174 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
PCDH1Q08174 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH1Q08174 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
PCDH1Q08174 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
PCDH1Q08174 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH1Q08174 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.39■□□□□ 0.85
PCDH1Q08174 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC20.39■□□□□ 0.85
PCDH1Q08174 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
PCDH1Q08174 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.39■□□□□ 0.85
PCDH1Q08174 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH1Q08174 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH1Q08174 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH1Q08174 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.38■□□□□ 0.85
PCDH1Q08174 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.38■□□□□ 0.85
PCDH1Q08174 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 AC105265.2-201ENST00000467189 838 ntBASIC20.38■□□□□ 0.85
PCDH1Q08174 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
PCDH1Q08174 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
PCDH1Q08174 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.38■□□□□ 0.85
PCDH1Q08174 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH1Q08174 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
PCDH1Q08174 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.37■□□□□ 0.85
PCDH1Q08174 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
PCDH1Q08174 AC027612.3-201ENST00000413684 1047 ntBASIC20.37■□□□□ 0.85
PCDH1Q08174 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH1Q08174 EEF1DP3-203ENST00000566025 782 ntBASIC20.37■□□□□ 0.85
PCDH1Q08174 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH1Q08174 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC20.37■□□□□ 0.85
PCDH1Q08174 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.37■□□□□ 0.85
PCDH1Q08174 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
PCDH1Q08174 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
PCDH1Q08174 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH1Q08174 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH1Q08174 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.36■□□□□ 0.85
PCDH1Q08174 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
PCDH1Q08174 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
PCDH1Q08174 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.36■□□□□ 0.85
PCDH1Q08174 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
PCDH1Q08174 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.36■□□□□ 0.85
PCDH1Q08174 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
PCDH1Q08174 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms