Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 NME4-211ENST00000620944 1193 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CL1P78423 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC16.99■□□□□ 0.31
CX3CL1P78423 AL358852.1-201ENST00000623174 1268 ntBASIC16.99■□□□□ 0.31
CX3CL1P78423 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 BX005040.4-201ENST00000637145 1518 ntBASIC16.99■□□□□ 0.31
CX3CL1P78423 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
CX3CL1P78423 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC16.98■□□□□ 0.31
CX3CL1P78423 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CX3CL1P78423 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC16.98■□□□□ 0.31
CX3CL1P78423 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.98■□□□□ 0.31
CX3CL1P78423 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
CX3CL1P78423 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.98■□□□□ 0.31
CX3CL1P78423 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.98■□□□□ 0.31
CX3CL1P78423 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC16.98■□□□□ 0.31
CX3CL1P78423 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
CX3CL1P78423 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC16.97■□□□□ 0.31
CX3CL1P78423 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC16.97■□□□□ 0.31
CX3CL1P78423 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC16.97■□□□□ 0.31
CX3CL1P78423 AC009237.3-201ENST00000393279 1427 ntBASIC16.97■□□□□ 0.31
CX3CL1P78423 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
CX3CL1P78423 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
CX3CL1P78423 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC16.97■□□□□ 0.31
CX3CL1P78423 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC16.97■□□□□ 0.31
CX3CL1P78423 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.97■□□□□ 0.31
CX3CL1P78423 AC026471.6-201ENST00000622954 1905 ntBASIC16.97■□□□□ 0.31
CX3CL1P78423 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC16.97■□□□□ 0.31
CX3CL1P78423 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
CX3CL1P78423 FBXW4P1-201ENST00000426721 2239 ntBASIC16.97■□□□□ 0.31
CX3CL1P78423 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CX3CL1P78423 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
CX3CL1P78423 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
CX3CL1P78423 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
CX3CL1P78423 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
CX3CL1P78423 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC16.96■□□□□ 0.31
CX3CL1P78423 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.96■□□□□ 0.31
CX3CL1P78423 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 AC073130.3-201ENST00000624389 2278 ntBASIC16.96■□□□□ 0.31
CX3CL1P78423 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
CX3CL1P78423 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC16.96■□□□□ 0.3
CX3CL1P78423 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC16.96■□□□□ 0.3
CX3CL1P78423 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.96■□□□□ 0.3
CX3CL1P78423 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 ZNRF2P3-201ENST00000424200 374 ntBASIC16.95■□□□□ 0.3
CX3CL1P78423 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CX3CL1P78423 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CX3CL1P78423 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC16.95■□□□□ 0.3
CX3CL1P78423 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC16.95■□□□□ 0.3
CX3CL1P78423 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 MIR6084-201ENST00000622012 110 ntBASIC16.95■□□□□ 0.3
CX3CL1P78423 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC16.95■□□□□ 0.3
CX3CL1P78423 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CX3CL1P78423 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
CX3CL1P78423 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CX3CL1P78423 GOLGA2P6-201ENST00000340929 2049 ntBASIC16.94■□□□□ 0.3
CX3CL1P78423 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC16.94■□□□□ 0.3
CX3CL1P78423 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
CX3CL1P78423 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC16.94■□□□□ 0.3
CX3CL1P78423 NT5C3AP1-201ENST00000394500 1012 ntBASIC16.94■□□□□ 0.3
CX3CL1P78423 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms