Protein–RNA interactions for Protein: P78334

GABRE, Gamma-aminobutyric acid receptor subunit epsilon, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABREP78334 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
GABREP78334 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
GABREP78334 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.15■□□□□ 0.82
GABREP78334 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
GABREP78334 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC20.15■□□□□ 0.82
GABREP78334 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 RPS2P4-201ENST00000476944 856 ntBASIC20.15■□□□□ 0.82
GABREP78334 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC20.15■□□□□ 0.82
GABREP78334 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.15■□□□□ 0.82
GABREP78334 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 AC010980.2-201ENST00000587099 1412 ntBASIC20.15■□□□□ 0.82
GABREP78334 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
GABREP78334 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
GABREP78334 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
GABREP78334 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 NKX6-3-202ENST00000524115 1683 ntTSL 2 BASIC20.14■□□□□ 0.81
GABREP78334 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.14■□□□□ 0.81
GABREP78334 AL596275.1-201ENST00000423464 877 ntBASIC20.14■□□□□ 0.81
GABREP78334 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC20.14■□□□□ 0.81
GABREP78334 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.14■□□□□ 0.81
GABREP78334 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.14■□□□□ 0.81
GABREP78334 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
GABREP78334 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC20.14■□□□□ 0.81
GABREP78334 AL591742.1-201ENST00000604433 565 ntBASIC20.14■□□□□ 0.81
GABREP78334 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
GABREP78334 AC092068.2-201ENST00000590491 1708 ntBASIC20.13■□□□□ 0.81
GABREP78334 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
GABREP78334 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC20.13■□□□□ 0.81
GABREP78334 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC20.13■□□□□ 0.81
GABREP78334 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.13■□□□□ 0.81
GABREP78334 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 POU5F1P4-201ENST00000413175 1085 ntBASIC20.13■□□□□ 0.81
GABREP78334 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.13■□□□□ 0.81
GABREP78334 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.13■□□□□ 0.81
GABREP78334 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.13■□□□□ 0.81
GABREP78334 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
GABREP78334 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
GABREP78334 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.12■□□□□ 0.81
GABREP78334 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
GABREP78334 UNC93B4-201ENST00000505679 747 ntBASIC20.12■□□□□ 0.81
GABREP78334 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC20.12■□□□□ 0.81
GABREP78334 AL162412.1-201ENST00000567129 965 ntBASIC20.12■□□□□ 0.81
GABREP78334 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.12■□□□□ 0.81
GABREP78334 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.12■□□□□ 0.81
GABREP78334 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
GABREP78334 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC20.12■□□□□ 0.81
GABREP78334 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
GABREP78334 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.11■□□□□ 0.81
GABREP78334 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC20.11■□□□□ 0.81
GABREP78334 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.11■□□□□ 0.81
GABREP78334 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC20.11■□□□□ 0.81
GABREP78334 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.11■□□□□ 0.81
GABREP78334 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
GABREP78334 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.11■□□□□ 0.81
GABREP78334 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC20.1■□□□□ 0.81
GABREP78334 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC20.1■□□□□ 0.81
GABREP78334 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
GABREP78334 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.1■□□□□ 0.81
GABREP78334 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.1■□□□□ 0.81
GABREP78334 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms