Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
EIF3EP60228 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC21.8■■□□□ 1.08
EIF3EP60228 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC21.8■■□□□ 1.08
EIF3EP60228 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC21.8■■□□□ 1.08
EIF3EP60228 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC21.8■■□□□ 1.08
EIF3EP60228 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC21.8■■□□□ 1.08
EIF3EP60228 AL355001.2-201ENST00000620617 1191 ntBASIC21.8■■□□□ 1.08
EIF3EP60228 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.8■■□□□ 1.08
EIF3EP60228 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 AC009237.3-201ENST00000393279 1427 ntBASIC21.8■■□□□ 1.08
EIF3EP60228 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
EIF3EP60228 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.79■■□□□ 1.08
EIF3EP60228 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
EIF3EP60228 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC21.79■■□□□ 1.08
EIF3EP60228 AF213884.3-201ENST00000563833 479 ntBASIC21.79■■□□□ 1.08
EIF3EP60228 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
EIF3EP60228 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3EP60228 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.78■■□□□ 1.08
EIF3EP60228 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
EIF3EP60228 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3EP60228 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3EP60228 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC21.78■■□□□ 1.08
EIF3EP60228 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC21.78■■□□□ 1.08
EIF3EP60228 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3EP60228 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
EIF3EP60228 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
EIF3EP60228 RASA4CP-201ENST00000424092 1398 ntBASIC21.77■■□□□ 1.08
EIF3EP60228 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC21.77■■□□□ 1.08
EIF3EP60228 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 MIR939-201ENST00000401314 82 ntBASIC21.77■■□□□ 1.08
EIF3EP60228 NALT1-201ENST00000429224 738 ntTSL 5 BASIC21.77■■□□□ 1.08
EIF3EP60228 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 PARN-205ENST00000539279 1557 ntTSL 2 BASIC21.77■■□□□ 1.08
EIF3EP60228 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC21.77■■□□□ 1.08
EIF3EP60228 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
EIF3EP60228 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
EIF3EP60228 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.07
EIF3EP60228 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EIF3EP60228 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
EIF3EP60228 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.76■■□□□ 1.07
EIF3EP60228 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
EIF3EP60228 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC21.76■■□□□ 1.07
EIF3EP60228 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC21.76■■□□□ 1.07
EIF3EP60228 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.76■■□□□ 1.07
EIF3EP60228 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC21.76■■□□□ 1.07
EIF3EP60228 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC21.76■■□□□ 1.07
EIF3EP60228 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
EIF3EP60228 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 AC055733.4-201ENST00000638462 1354 ntBASIC21.75■■□□□ 1.07
EIF3EP60228 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 AL049796.1-201ENST00000565336 1766 ntBASIC21.75■■□□□ 1.07
EIF3EP60228 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC21.75■■□□□ 1.07
EIF3EP60228 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
EIF3EP60228 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC21.75■■□□□ 1.07
EIF3EP60228 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC21.75■■□□□ 1.07
EIF3EP60228 AL031432.3-201ENST00000607698 485 ntBASIC21.75■■□□□ 1.07
EIF3EP60228 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
EIF3EP60228 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.75■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms