Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC15.76■□□□□ 0.11
CMC4P56277 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC15.76■□□□□ 0.11
CMC4P56277 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC15.76■□□□□ 0.11
CMC4P56277 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC15.76■□□□□ 0.11
CMC4P56277 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC15.76■□□□□ 0.11
CMC4P56277 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CMC4P56277 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CMC4P56277 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC15.75■□□□□ 0.11
CMC4P56277 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 AIRN-201ENST00000601203 4374 ntBASIC15.75■□□□□ 0.11
CMC4P56277 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC15.75■□□□□ 0.11
CMC4P56277 SERP1-208ENST00000491660 830 ntTSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 AC093762.3-201ENST00000641918 318 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CMC4P56277 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CMC4P56277 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC15.75■□□□□ 0.11
CMC4P56277 AC003102.1-202ENST00000563394 1796 ntBASIC15.75■□□□□ 0.11
CMC4P56277 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CMC4P56277 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 KRT18P5-201ENST00000436075 1291 ntBASIC15.74■□□□□ 0.11
CMC4P56277 GLI3-203ENST00000437480 451 ntTSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 AL162430.1-201ENST00000480705 870 ntBASIC15.74■□□□□ 0.11
CMC4P56277 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 AC104187.1-201ENST00000607510 612 ntBASIC15.74■□□□□ 0.11
CMC4P56277 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC15.74■□□□□ 0.11
CMC4P56277 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CMC4P56277 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC15.74■□□□□ 0.11
CMC4P56277 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CMC4P56277 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC15.73■□□□□ 0.11
CMC4P56277 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CMC4P56277 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC15.73■□□□□ 0.11
CMC4P56277 LSR-203ENST00000360798 1963 ntTSL 2 BASIC15.73■□□□□ 0.11
CMC4P56277 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC15.73■□□□□ 0.11
CMC4P56277 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC15.73■□□□□ 0.11
CMC4P56277 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC15.73■□□□□ 0.11
CMC4P56277 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 AC016769.1-201ENST00000409132 1010 ntBASIC15.73■□□□□ 0.11
CMC4P56277 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC15.73■□□□□ 0.11
CMC4P56277 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 AC010141.2-201ENST00000452426 721 ntBASIC15.73■□□□□ 0.11
CMC4P56277 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC15.73■□□□□ 0.11
CMC4P56277 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC15.73■□□□□ 0.11
CMC4P56277 AP001160.3-201ENST00000601484 763 ntBASIC15.73■□□□□ 0.11
CMC4P56277 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.73■□□□□ 0.11
CMC4P56277 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 AC006455.5-202ENST00000615248 2284 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CMC4P56277 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CMC4P56277 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC15.72■□□□□ 0.11
CMC4P56277 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC15.72■□□□□ 0.11
CMC4P56277 AC004854.2-201ENST00000608450 1441 ntBASIC15.72■□□□□ 0.11
CMC4P56277 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.72■□□□□ 0.11
CMC4P56277 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CMC4P56277 SLC7A5P1-201ENST00000568957 537 ntBASIC15.72■□□□□ 0.11
CMC4P56277 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC15.72■□□□□ 0.11
CMC4P56277 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC15.72■□□□□ 0.11
CMC4P56277 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC15.72■□□□□ 0.11
CMC4P56277 RARG-204ENST00000543726 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
CMC4P56277 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CMC4P56277 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CMC4P56277 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
CMC4P56277 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms