Protein–RNA interactions for Protein: P53538

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, yeastyeast

Predicted RBP Predictions only

Length 206 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSU72P53538 YIL054WYIL054W 318 nt2.55□□□□□ -2
SSU72P53538 FIP1YJR093C 984 nt2.55□□□□□ -2
SSU72P53538 ARC19YKL013C 516 nt2.55□□□□□ -2
SSU72P53538 GAB1YLR459W 1185 nt2.55□□□□□ -2
SSU72P53538 CSM3YMR048W 954 nt2.55□□□□□ -2
SSU72P53538 YNL035CYNL035C 1170 nt2.55□□□□□ -2
SSU72P53538 YOL118CYOL118C 309 nt2.55□□□□□ -2
SSU72P53538 VAM3YOR106W 852 nt2.55□□□□□ -2
SSU72P53538 BNI4YNL233W 2679 nt2.54□□□□□ -2
SSU72P53538 RPS14AYCR031C 414 nt2.54□□□□□ -2
SSU72P53538 OPI6YDL096C 327 nt2.54□□□□□ -2
SSU72P53538 YDR124WYDR124W 975 nt2.54□□□□□ -2
SSU72P53538 ARI1YGL157W 1044 nt2.54□□□□□ -2
SSU72P53538 QCR10YHR001W-A 234 nt2.54□□□□□ -2
SSU72P53538 SDS3YIL084C 984 nt2.54□□□□□ -2
SSU72P53538 ARG3YJL088W 1017 nt2.54□□□□□ -2
SSU72P53538 AIM26YKL037W 357 nt2.54□□□□□ -2
SSU72P53538 AHP1YLR109W 531 nt2.54□□□□□ -2
SSU72P53538 MTG1YMR097C 1104 nt2.54□□□□□ -2
SSU72P53538 MRPS8YMR158W 468 nt2.54□□□□□ -2
SSU72P53538 RCE1YMR274C 948 nt2.54□□□□□ -2
SSU72P53538 TFB6YOR352W 1032 nt2.54□□□□□ -2
SSU72P53538 SUR1YPL057C 1149 nt2.54□□□□□ -2
SSU72P53538 HUT1YPL244C 1020 nt2.54□□□□□ -2
SSU72P53538 ACM1YPL267W 630 nt2.54□□□□□ -2
SSU72P53538 SGM1YJR134C 2124 nt2.54□□□□□ -2
SSU72P53538 CET1YPL228W 1650 nt2.53□□□□□ -2
SSU72P53538 TFB2YPL122C 1542 nt2.53□□□□□ -2
SSU72P53538 COM2YER130C 1332 nt2.53□□□□□ -2
SSU72P53538 NHP10YDL002C 612 nt2.53□□□□□ -2
SSU72P53538 IZH1YDR492W 951 nt2.53□□□□□ -2
SSU72P53538 HYP2YEL034W 474 nt2.53□□□□□ -2
SSU72P53538 YER138W-AYER138W-A 105 nt2.53□□□□□ -2
SSU72P53538 PRP18YGR006W 756 nt2.53□□□□□ -2
SSU72P53538 TCD1YHR003C 1290 nt2.53□□□□□ -2
SSU72P53538 BMT5YIL096C 1011 nt2.53□□□□□ -2
SSU72P53538 DCG1YIR030C 735 nt2.53□□□□□ -2
SSU72P53538 YJR056CYJR056C 711 nt2.53□□□□□ -2
SSU72P53538 YKL162CYKL162C 1209 nt2.53□□□□□ -2
SSU72P53538 YML090WYML090W 387 nt2.53□□□□□ -2
SSU72P53538 YBL107W-AYBL107W-A 105 nt2.53□□□□□ -2
SSU72P53538 snR11snR11 258 nt2.53□□□□□ -2
SSU72P53538 MCA1YOR197W 1299 nt2.53□□□□□ -2
SSU72P53538 PIS1YPR113W 663 nt2.53□□□□□ -2
SSU72P53538 CSH1YBR161W 1131 nt2.53□□□□□ -2
SSU72P53538 TOP2YNL088W 4287 nt2.53□□□□□ -2
SSU72P53538 SIR3YLR442C 2937 nt2.53□□□□□ -2
SSU72P53538 UBP14YBR058C 2346 nt2.53□□□□□ -2
SSU72P53538 SIN3YOL004W 4611 nt2.53□□□□□ -2
SSU72P53538 YPS6YIR039C 1614 nt2.53□□□□□ -2
SSU72P53538 FLO11YIR019C 4104 nt2.53□□□□□ -2.01
SSU72P53538 CYR1YJL005W 6081 nt2.52□□□□□ -2.01
SSU72P53538 ESL1YIL151C 3357 nt2.52□□□□□ -2.01
SSU72P53538 STE24YJR117W 1362 nt2.52□□□□□ -2.01
SSU72P53538 ICR1ICR1 3199 nt2.52□□□□□ -2.01
SSU72P53538 ESC1YMR219W 4977 nt2.52□□□□□ -2.01
SSU72P53538 SMY2YBR172C 2223 nt2.52□□□□□ -2.01
SSU72P53538 YDR535CYDR535C 501 nt2.52□□□□□ -2.01
SSU72P53538 YGR039WYGR039W 312 nt2.52□□□□□ -2.01
SSU72P53538 EMC2YJR088C 879 nt2.52□□□□□ -2.01
SSU72P53538 YAR075WYAR075W 474 nt2.52□□□□□ -2.01
SSU72P53538 TEM1YML064C 738 nt2.52□□□□□ -2.01
SSU72P53538 YNL043CYNL043C 321 nt2.52□□□□□ -2.01
SSU72P53538 ATG19YOL082W 1248 nt2.52□□□□□ -2.01
SSU72P53538 YOR062CYOR062C 807 nt2.52□□□□□ -2.01
SSU72P53538 SEC7YDR170C 6030 nt2.52□□□□□ -2.01
SSU72P53538 HUL5YGL141W 2733 nt2.51□□□□□ -2.01
SSU72P53538 NSA2YER126C 786 nt2.51□□□□□ -2.01
SSU72P53538 YGL006W-AYGL006W-A 111 nt2.51□□□□□ -2.01
SSU72P53538 COX23YHR116W 456 nt2.51□□□□□ -2.01
SSU72P53538 YIL156W-AYIL156W-A 402 nt2.51□□□□□ -2.01
SSU72P53538 MAK16YAL025C 921 nt2.51□□□□□ -2.01
SSU72P53538 MRPL38YKL170W 417 nt2.51□□□□□ -2.01
SSU72P53538 RIF2YLR453C 1188 nt2.51□□□□□ -2.01
SSU72P53538 MPP6YNR024W 561 nt2.51□□□□□ -2.01
SSU72P53538 LCL1YPL056C 306 nt2.51□□□□□ -2.01
SSU72P53538 MRPL27YBR282W 441 nt2.51□□□□□ -2.01
SSU72P53538 YKU80YMR106C 1890 nt2.51□□□□□ -2.01
SSU72P53538 MMS1YPR164W 4224 nt2.51□□□□□ -2.01
SSU72P53538 YIL169CYIL169C 2988 nt2.51□□□□□ -2.01
SSU72P53538 TDA1YMR291W 1761 nt2.51□□□□□ -2.01
SSU72P53538 BNR1YIL159W 4128 nt2.51□□□□□ -2.01
SSU72P53538 ECM29YHL030W 5607 nt2.5□□□□□ -2.01
SSU72P53538 SAD1YFR005C 1347 nt2.5□□□□□ -2.01
SSU72P53538 YCR016WYCR016W 873 nt2.5□□□□□ -2.01
SSU72P53538 BUD26YDR241W 288 nt2.5□□□□□ -2.01
SSU72P53538 PMI40YER003C 1290 nt2.5□□□□□ -2.01
SSU72P53538 FMP32YFL046W 624 nt2.5□□□□□ -2.01
SSU72P53538 BAT1YHR208W 1182 nt2.5□□□□□ -2.01
SSU72P53538 HYM1YKL189W 1200 nt2.5□□□□□ -2.01
SSU72P53538 YIP3YNL044W 531 nt2.5□□□□□ -2.01
SSU72P53538 snR42snR42 351 nt2.5□□□□□ -2.01
SSU72P53538 RRP7YCL031C 894 nt2.5□□□□□ -2.01
SSU72P53538 POL3YDL102W 3294 nt2.5□□□□□ -2.01
SSU72P53538 SSN2YDR443C 4263 nt2.5□□□□□ -2.01
SSU72P53538 EAP1YKL204W 1899 nt2.5□□□□□ -2.01
SSU72P53538 SPH1YLR313C 1593 nt2.49□□□□□ -2.01
SSU72P53538 YTA7YGR270W 4140 nt2.49□□□□□ -2.01
SSU72P53538 IKI3YLR384C 4050 nt2.49□□□□□ -2.01
SSU72P53538 ARF1YDL192W 546 nt2.49□□□□□ -2.01
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms