Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC26.61■■□□□ 1.85
NUP98P52948 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC26.61■■□□□ 1.85
NUP98P52948 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NUP98P52948 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NUP98P52948 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NUP98P52948 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.61■■□□□ 1.85
NUP98P52948 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
NUP98P52948 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
NUP98P52948 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
NUP98P52948 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC26.6■■□□□ 1.85
NUP98P52948 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
NUP98P52948 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC26.6■■□□□ 1.85
NUP98P52948 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC26.6■■□□□ 1.85
NUP98P52948 AC091874.3-201ENST00000512672 1195 ntBASIC26.6■■□□□ 1.85
NUP98P52948 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.6■■□□□ 1.85
NUP98P52948 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
NUP98P52948 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC26.6■■□□□ 1.85
NUP98P52948 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC26.6■■□□□ 1.85
NUP98P52948 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC26.6■■□□□ 1.85
NUP98P52948 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
NUP98P52948 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 RARRES2P4-201ENST00000514074 484 ntBASIC26.59■■□□□ 1.85
NUP98P52948 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC26.59■■□□□ 1.85
NUP98P52948 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.59■■□□□ 1.85
NUP98P52948 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 AC080038.3-201ENST00000623346 1952 ntBASIC26.59■■□□□ 1.85
NUP98P52948 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
NUP98P52948 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC26.59■■□□□ 1.85
NUP98P52948 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NUP98P52948 AC098590.1-201ENST00000468126 897 ntBASIC26.58■■□□□ 1.85
NUP98P52948 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC26.58■■□□□ 1.85
NUP98P52948 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC26.58■■□□□ 1.85
NUP98P52948 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC26.58■■□□□ 1.85
NUP98P52948 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
NUP98P52948 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC26.58■■□□□ 1.84
NUP98P52948 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC26.58■■□□□ 1.84
NUP98P52948 AC008687.6-201ENST00000596318 630 ntBASIC26.58■■□□□ 1.84
NUP98P52948 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
NUP98P52948 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC26.58■■□□□ 1.84
NUP98P52948 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC26.57■■□□□ 1.84
NUP98P52948 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUP98P52948 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
NUP98P52948 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC26.57■■□□□ 1.84
NUP98P52948 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUP98P52948 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUP98P52948 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC26.57■■□□□ 1.84
NUP98P52948 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC26.57■■□□□ 1.84
NUP98P52948 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC26.57■■□□□ 1.84
NUP98P52948 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC26.57■■□□□ 1.84
NUP98P52948 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
NUP98P52948 SELENOO-201ENST00000380903 2315 ntAPPRIS P2 TSL 1 (best) BASIC26.57■■□□□ 1.84
NUP98P52948 SELENOO-203ENST00000611222 2311 ntAPPRIS ALT2 TSL 5 BASIC26.57■■□□□ 1.84
NUP98P52948 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC26.56■■□□□ 1.84
NUP98P52948 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC26.56■■□□□ 1.84
NUP98P52948 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NUP98P52948 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC26.56■■□□□ 1.84
NUP98P52948 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
NUP98P52948 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
NUP98P52948 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
NUP98P52948 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC26.56■■□□□ 1.84
NUP98P52948 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC26.56■■□□□ 1.84
NUP98P52948 FAM99A-202ENST00000538190 1989 ntBASIC26.56■■□□□ 1.84
NUP98P52948 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
NUP98P52948 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC26.55■■□□□ 1.84
NUP98P52948 AC093827.2-201ENST00000512654 315 ntBASIC26.55■■□□□ 1.84
NUP98P52948 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC26.55■■□□□ 1.84
NUP98P52948 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC26.55■■□□□ 1.84
NUP98P52948 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 AC008694.1-202ENST00000636953 945 ntBASIC26.55■■□□□ 1.84
NUP98P52948 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC26.55■■□□□ 1.84
NUP98P52948 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC26.55■■□□□ 1.84
NUP98P52948 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC26.55■■□□□ 1.84
NUP98P52948 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC26.55■■□□□ 1.84
NUP98P52948 AC091799.1-201ENST00000422823 811 ntBASIC26.55■■□□□ 1.84
NUP98P52948 FAM201B-201ENST00000458407 597 ntBASIC26.55■■□□□ 1.84
NUP98P52948 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 C11orf96-202ENST00000528572 1834 ntBASIC26.55■■□□□ 1.84
NUP98P52948 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
NUP98P52948 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NUP98P52948 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
NUP98P52948 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
NUP98P52948 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC26.54■■□□□ 1.84
NUP98P52948 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms