Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGA2P52926 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGA2P52926 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
HMGA2P52926 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
HMGA2P52926 AC092667.1-201ENST00000434301 2586 ntBASIC19.33■□□□□ 0.69
HMGA2P52926 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGA2P52926 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
HMGA2P52926 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGA2P52926 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
HMGA2P52926 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
HMGA2P52926 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
HMGA2P52926 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.33■□□□□ 0.68
HMGA2P52926 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
HMGA2P52926 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.33■□□□□ 0.68
HMGA2P52926 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGA2P52926 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
HMGA2P52926 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
HMGA2P52926 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.32■□□□□ 0.68
HMGA2P52926 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
HMGA2P52926 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 AL121603.2-201ENST00000557373 2117 ntBASIC19.32■□□□□ 0.68
HMGA2P52926 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
HMGA2P52926 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
HMGA2P52926 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
HMGA2P52926 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
HMGA2P52926 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
HMGA2P52926 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 PTCHD3P2-201ENST00000424937 1205 ntBASIC19.31■□□□□ 0.68
HMGA2P52926 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC19.31■□□□□ 0.68
HMGA2P52926 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGA2P52926 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 STX5-203ENST00000394690 1568 ntTSL 5 BASIC19.31■□□□□ 0.68
HMGA2P52926 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
HMGA2P52926 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
HMGA2P52926 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGA2P52926 SERBP1P1-201ENST00000396021 1160 ntBASIC19.3■□□□□ 0.68
HMGA2P52926 DUX4L19-201ENST00000557448 1267 ntBASIC19.3■□□□□ 0.68
HMGA2P52926 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC19.3■□□□□ 0.68
HMGA2P52926 AC136469.2-201ENST00000623944 1028 ntBASIC19.3■□□□□ 0.68
HMGA2P52926 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
HMGA2P52926 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
HMGA2P52926 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.3■□□□□ 0.68
HMGA2P52926 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
HMGA2P52926 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGA2P52926 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.29■□□□□ 0.68
HMGA2P52926 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 SHISA9-205ENST00000639941 1135 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
HMGA2P52926 AC073314.1-201ENST00000568729 2216 ntBASIC19.29■□□□□ 0.68
HMGA2P52926 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.29■□□□□ 0.68
HMGA2P52926 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
HMGA2P52926 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.29■□□□□ 0.68
HMGA2P52926 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC19.28■□□□□ 0.68
HMGA2P52926 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
HMGA2P52926 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGA2P52926 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
HMGA2P52926 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC19.28■□□□□ 0.68
HMGA2P52926 AC011298.3-201ENST00000615796 283 ntBASIC19.28■□□□□ 0.68
HMGA2P52926 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms