Protein–RNA interactions for Protein: P40084

RTR1, RNA polymerase II subunit B1 CTD phosphatase RTR1, yeastyeast

Predicted RBP Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTR1P40084 PSY1YKL076C 384 nt3.06□□□□□ -1.92
RTR1P40084 MED11YMR112C 396 nt3.06□□□□□ -1.92
RTR1P40084 SSN8YNL025C 972 nt3.06□□□□□ -1.92
RTR1P40084 CIN1YOR349W 3045 nt3.06□□□□□ -1.92
RTR1P40084 MRD1YPR112C 2664 nt3.06□□□□□ -1.92
RTR1P40084 KEL2YGR238C 2649 nt3.06□□□□□ -1.92
RTR1P40084 YPK3YBR028C 1578 nt3.05□□□□□ -1.92
RTR1P40084 SLH1YGR271W 5904 nt3.05□□□□□ -1.92
RTR1P40084 SPO71YDR104C 3738 nt3.05□□□□□ -1.92
RTR1P40084 TMN3YER113C 2121 nt3.05□□□□□ -1.92
RTR1P40084 YDR098C-BYDR098C-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YDR210C-DYDR210C-D 5268 nt3.05□□□□□ -1.92
RTR1P40084 YDR316W-BYDR316W-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YDR365W-BYDR365W-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YER138CYER138C 5268 nt3.05□□□□□ -1.92
RTR1P40084 YER160CYER160C 5268 nt3.05□□□□□ -1.92
RTR1P40084 YGR038C-BYGR038C-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YGR161C-DYGR161C-D 5268 nt3.05□□□□□ -1.92
RTR1P40084 YJR027WYJR027W 5268 nt3.05□□□□□ -1.92
RTR1P40084 YLR157C-BYLR157C-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YML039WYML039W 5268 nt3.05□□□□□ -1.92
RTR1P40084 YML045WYML045W 5268 nt3.05□□□□□ -1.92
RTR1P40084 YMR050CYMR050C 5268 nt3.05□□□□□ -1.92
RTR1P40084 YOL103W-BYOL103W-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YBR012W-BYBR012W-B 5271 nt3.05□□□□□ -1.92
RTR1P40084 YOR142W-BYOR142W-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YPL257W-BYPL257W-B 5268 nt3.05□□□□□ -1.92
RTR1P40084 YPR158W-BYPR158W-B 5271 nt3.05□□□□□ -1.92
RTR1P40084 PDR11YIL013C 4236 nt3.04□□□□□ -1.92
RTR1P40084 DUF1YOL087C 3351 nt3.04□□□□□ -1.92
RTR1P40084 RMT2YDR465C 1239 nt3.04□□□□□ -1.92
RTR1P40084 GPP2YER062C 753 nt3.04□□□□□ -1.92
RTR1P40084 YGR149WYGR149W 1299 nt3.04□□□□□ -1.92
RTR1P40084 UNG1YML021C 1080 nt3.04□□□□□ -1.92
RTR1P40084 YMR310CYMR310C 954 nt3.04□□□□□ -1.92
RTR1P40084 YDL199CYDL199C 2064 nt3.04□□□□□ -1.92
RTR1P40084 PEX6YNL329C 3093 nt3.04□□□□□ -1.92
RTR1P40084 VTC3YPL019C 2508 nt3.03□□□□□ -1.92
RTR1P40084 VPS3YDR495C 3036 nt3.03□□□□□ -1.92
RTR1P40084 YAT2YER024W 2772 nt3.03□□□□□ -1.92
RTR1P40084 YDR355CYDR355C 303 nt3.03□□□□□ -1.92
RTR1P40084 GRX2YDR513W 432 nt3.03□□□□□ -1.92
RTR1P40084 PAU14YIL176C 363 nt3.03□□□□□ -1.92
RTR1P40084 PAU1YJL223C 363 nt3.03□□□□□ -1.92
RTR1P40084 YKR011CYKR011C 1062 nt3.03□□□□□ -1.92
RTR1P40084 CAF20YOR276W 486 nt3.03□□□□□ -1.92
RTR1P40084 TOM70YNL121C 1854 nt3.03□□□□□ -1.93
RTR1P40084 ACA1YER045C 1470 nt3.03□□□□□ -1.93
RTR1P40084 GET1YGL020C 708 nt3.02□□□□□ -1.93
RTR1P40084 YIL089WYIL089W 618 nt3.02□□□□□ -1.93
RTR1P40084 PBI1YPL272C 1554 nt3.02□□□□□ -1.93
RTR1P40084 RRM3YHR031C 2172 nt3.02□□□□□ -1.93
RTR1P40084 PIN4YBL051C 2007 nt3.02□□□□□ -1.93
RTR1P40084 PST1YDR055W 1335 nt3.01□□□□□ -1.93
RTR1P40084 SCP160YJL080C 3669 nt3.01□□□□□ -1.93
RTR1P40084 YCR064CYCR064C 411 nt3.01□□□□□ -1.93
RTR1P40084 PCL9YDL179W 915 nt3.01□□□□□ -1.93
RTR1P40084 YDR442WYDR442W 393 nt3.01□□□□□ -1.93
RTR1P40084 YGR219WYGR219W 342 nt3.01□□□□□ -1.93
RTR1P40084 SWD2YKL018W 990 nt3.01□□□□□ -1.93
RTR1P40084 YKL091CYKL091C 933 nt3.01□□□□□ -1.93
RTR1P40084 RSM19YNR037C 276 nt3.01□□□□□ -1.93
RTR1P40084 PHO88YBR106W 567 nt3.01□□□□□ -1.93
RTR1P40084 YBR209WYBR209W 318 nt3.01□□□□□ -1.93
RTR1P40084 SGS1YMR190C 4344 nt3.01□□□□□ -1.93
RTR1P40084 YOR365CYOR365C 2112 nt3.01□□□□□ -1.93
RTR1P40084 TRM12YML005W 1389 nt3□□□□□ -1.93
RTR1P40084 ITT1YML068W 1395 nt3□□□□□ -1.93
RTR1P40084 MPC54YOR177C 1395 nt3□□□□□ -1.93
RTR1P40084 YKR015CYKR015C 1707 nt3□□□□□ -1.93
RTR1P40084 RSM24YDR175C 960 nt3□□□□□ -1.93
RTR1P40084 MPS2YGL075C 1164 nt3□□□□□ -1.93
RTR1P40084 ASG7YJL170C 630 nt3□□□□□ -1.93
RTR1P40084 SPP382YLR424W 2127 nt3□□□□□ -1.93
RTR1P40084 SEC65YML105C 822 nt3□□□□□ -1.93
RTR1P40084 END3YNL084C 1050 nt3□□□□□ -1.93
RTR1P40084 SPS4YOR313C 1017 nt3□□□□□ -1.93
RTR1P40084 GCD10YNL062C 1437 nt3□□□□□ -1.93
RTR1P40084 MSS4YDR208W 2340 nt2.99□□□□□ -1.93
RTR1P40084 OSW7YFR039C 1533 nt2.99□□□□□ -1.93
RTR1P40084 LSM6YDR378C 261 nt2.99□□□□□ -1.93
RTR1P40084 ENV10YLR065C 546 nt2.99□□□□□ -1.93
RTR1P40084 AAH1YNL141W 1044 nt2.99□□□□□ -1.93
RTR1P40084 HNT3YOR258W 654 nt2.99□□□□□ -1.93
RTR1P40084 YOR263CYOR263C 408 nt2.99□□□□□ -1.93
RTR1P40084 VIP1YLR410W 3441 nt2.99□□□□□ -1.93
RTR1P40084 ERG28YER044C 447 nt2.98□□□□□ -1.93
RTR1P40084 SYS1YJL004C 612 nt2.98□□□□□ -1.93
RTR1P40084 YLR154W-EYLR154W-E 204 nt2.98□□□□□ -1.93
RTR1P40084 RCE1YMR274C 948 nt2.98□□□□□ -1.93
RTR1P40084 EXO84YBR102C 2262 nt2.98□□□□□ -1.93
RTR1P40084 AAD16YFL057C 459 nt2.97□□□□□ -1.93
RTR1P40084 RSM26YJR101W 801 nt2.97□□□□□ -1.93
RTR1P40084 YAR075WYAR075W 474 nt2.97□□□□□ -1.93
RTR1P40084 YNL184CYNL184C 327 nt2.97□□□□□ -1.93
RTR1P40084 snR11snR11 258 nt2.97□□□□□ -1.93
RTR1P40084 ATG11YPR049C 3537 nt2.97□□□□□ -1.93
RTR1P40084 SMC6YLR383W 3345 nt2.97□□□□□ -1.93
RTR1P40084 CIK1YMR198W 1785 nt2.97□□□□□ -1.93
RTR1P40084 VMA8YEL051W 771 nt2.96□□□□□ -1.94
Retrieved 100 of 7,029 protein–RNA pairs in 33.3 ms