Protein–RNA interactions for Protein: P35712

SOX6, Transcription factor SOX-6, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6P35712 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SOX6P35712 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.9■□□□□ 0.62
SOX6P35712 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 GUK1-208ENST00000366728 842 ntTSL 2 BASIC18.9■□□□□ 0.62
SOX6P35712 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC18.9■□□□□ 0.62
SOX6P35712 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
SOX6P35712 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SOX6P35712 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.62
SOX6P35712 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.62
SOX6P35712 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
SOX6P35712 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.89■□□□□ 0.61
SOX6P35712 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC18.89■□□□□ 0.61
SOX6P35712 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
SOX6P35712 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC18.89■□□□□ 0.61
SOX6P35712 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC18.89■□□□□ 0.61
SOX6P35712 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SOX6P35712 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.89■□□□□ 0.61
SOX6P35712 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC18.89■□□□□ 0.61
SOX6P35712 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 AC090377.1-201ENST00000585691 1762 ntTSL 3 BASIC18.88■□□□□ 0.61
SOX6P35712 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.88■□□□□ 0.61
SOX6P35712 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.88■□□□□ 0.61
SOX6P35712 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.88■□□□□ 0.61
SOX6P35712 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
SOX6P35712 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC18.88■□□□□ 0.61
SOX6P35712 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.88■□□□□ 0.61
SOX6P35712 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.88■□□□□ 0.61
SOX6P35712 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SOX6P35712 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.87■□□□□ 0.61
SOX6P35712 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.87■□□□□ 0.61
SOX6P35712 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.87■□□□□ 0.61
SOX6P35712 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC18.87■□□□□ 0.61
SOX6P35712 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.87■□□□□ 0.61
SOX6P35712 AP005212.1-201ENST00000581547 1997 ntBASIC18.87■□□□□ 0.61
SOX6P35712 AC074183.2-201ENST00000623112 922 ntBASIC18.87■□□□□ 0.61
SOX6P35712 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SOX6P35712 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
SOX6P35712 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
SOX6P35712 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX6P35712 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 AL049796.1-201ENST00000565336 1766 ntBASIC18.86■□□□□ 0.61
SOX6P35712 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.86■□□□□ 0.61
SOX6P35712 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.86■□□□□ 0.61
SOX6P35712 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC18.86■□□□□ 0.61
SOX6P35712 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 AFG3L1P-217ENST00000557444 2447 ntBASIC18.86■□□□□ 0.61
SOX6P35712 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.86■□□□□ 0.61
SOX6P35712 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
SOX6P35712 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.86■□□□□ 0.61
SOX6P35712 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SOX6P35712 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms