Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 PMC1YGL006W 3522 nt4.3□□□□□ -1.72
MSH2P25847 PBP4YDL053C 558 nt4.3□□□□□ -1.72
MSH2P25847 OTU1YFL044C 906 nt4.3□□□□□ -1.72
MSH2P25847 YFH7YFR007W 1062 nt4.3□□□□□ -1.72
MSH2P25847 RPL17AYKL180W 555 nt4.3□□□□□ -1.72
MSH2P25847 YLR222C-AYLR222C-A 231 nt4.3□□□□□ -1.72
MSH2P25847 GAL7YBR018C 1101 nt4.3□□□□□ -1.72
MSH2P25847 CMD1YBR109C 444 nt4.3□□□□□ -1.72
MSH2P25847 SUS1YBR111W-A 291 nt4.3□□□□□ -1.72
MSH2P25847 APD1YBR151W 951 nt4.3□□□□□ -1.72
MSH2P25847 DPB3YBR278W 606 nt4.3□□□□□ -1.72
MSH2P25847 YCT1YLL055W 1596 nt4.3□□□□□ -1.72
MSH2P25847 SMI1YGR229C 1518 nt4.3□□□□□ -1.72
MSH2P25847 YKL050CYKL050C 2769 nt4.3□□□□□ -1.72
MSH2P25847 SYO1YDL063C 1863 nt4.29□□□□□ -1.72
MSH2P25847 DBP3YGL078C 1572 nt4.29□□□□□ -1.72
MSH2P25847 SUC2YIL162W 1599 nt4.29□□□□□ -1.72
MSH2P25847 TCO89YPL180W 2400 nt4.29□□□□□ -1.72
MSH2P25847 snR5snR5 204 nt4.29□□□□□ -1.72
MSH2P25847 UPF3YGR072W 1164 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)CtQ(UUG)C 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)D1tQ(UUG)D1 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)D2tQ(UUG)D2 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)D3tQ(UUG)D3 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)E1tQ(UUG)E1 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)HtQ(UUG)H 72 nt4.29□□□□□ -1.72
MSH2P25847 tQ(UUG)LtQ(UUG)L 72 nt4.29□□□□□ -1.72
MSH2P25847 YJR111CYJR111C 852 nt4.29□□□□□ -1.72
MSH2P25847 NYV1YLR093C 762 nt4.29□□□□□ -1.72
MSH2P25847 YMR254CYMR254C 309 nt4.29□□□□□ -1.72
MSH2P25847 OCA2YNL056W 594 nt4.29□□□□□ -1.72
MSH2P25847 TSR4YOL022C 1227 nt4.29□□□□□ -1.72
MSH2P25847 YPL025CYPL025C 558 nt4.29□□□□□ -1.72
MSH2P25847 CUR1YPR158W 759 nt4.29□□□□□ -1.72
MSH2P25847 COP1YDL145C 3606 nt4.29□□□□□ -1.72
MSH2P25847 FUN12YAL035W 3009 nt4.29□□□□□ -1.72
MSH2P25847 SEG1YMR086W 2883 nt4.28□□□□□ -1.72
MSH2P25847 HOS3YPL116W 2094 nt4.28□□□□□ -1.72
MSH2P25847 CWC2YDL209C 1020 nt4.28□□□□□ -1.72
MSH2P25847 snR9snR9 187 nt4.28□□□□□ -1.72
MSH2P25847 TGL2YDR058C 981 nt4.28□□□□□ -1.72
MSH2P25847 YFL019CYFL019C 354 nt4.28□□□□□ -1.72
MSH2P25847 PBA1YLR199C 831 nt4.28□□□□□ -1.72
MSH2P25847 YLR379WYLR379W 375 nt4.28□□□□□ -1.72
MSH2P25847 YBL028CYBL028C 321 nt4.28□□□□□ -1.72
MSH2P25847 TAP42YMR028W 1101 nt4.28□□□□□ -1.72
MSH2P25847 ALG8YOR067C 1734 nt4.28□□□□□ -1.72
MSH2P25847 PHM7YOL084W 2976 nt4.28□□□□□ -1.72
MSH2P25847 GCR1YPL075W 2358 nt4.27□□□□□ -1.73
MSH2P25847 VID28YIL017C 2766 nt4.27□□□□□ -1.73
MSH2P25847 YNL284C-AYNL284C-A 1323 nt4.27□□□□□ -1.73
MSH2P25847 RIM4YHL024W 2142 nt4.27□□□□□ -1.73
MSH2P25847 APC5YOR249C 2058 nt4.27□□□□□ -1.73
MSH2P25847 THI13YDL244W 1023 nt4.27□□□□□ -1.73
MSH2P25847 YDR018CYDR018C 1191 nt4.27□□□□□ -1.73
MSH2P25847 SLD5YDR489W 885 nt4.27□□□□□ -1.73
MSH2P25847 YEL075CYEL075C 369 nt4.27□□□□□ -1.73
MSH2P25847 PEA2YER149C 1263 nt4.27□□□□□ -1.73
MSH2P25847 BIO2YGR286C 1128 nt4.27□□□□□ -1.73
MSH2P25847 GIC1YHR061C 945 nt4.27□□□□□ -1.73
MSH2P25847 YAL004WYAL004W 648 nt4.27□□□□□ -1.73
MSH2P25847 THI11YJR156C 1023 nt4.27□□□□□ -1.73
MSH2P25847 YKL069WYKL069W 543 nt4.27□□□□□ -1.73
MSH2P25847 YKL070WYKL070W 510 nt4.27□□□□□ -1.73
MSH2P25847 VMA5YKL080W 1179 nt4.27□□□□□ -1.73
MSH2P25847 FMP46YKR049C 402 nt4.27□□□□□ -1.73
MSH2P25847 HMX1YLR205C 954 nt4.27□□□□□ -1.73
MSH2P25847 BUR2YLR226W 1188 nt4.27□□□□□ -1.73
MSH2P25847 PAI3YMR174C 207 nt4.27□□□□□ -1.73
MSH2P25847 PWR1PWR1 941 nt4.27□□□□□ -1.73
MSH2P25847 VIP1YLR410W 3441 nt4.27□□□□□ -1.73
MSH2P25847 NDC80YIL144W 2076 nt4.26□□□□□ -1.73
MSH2P25847 RIA1YNL163C 3333 nt4.26□□□□□ -1.73
MSH2P25847 YRM1YOR172W 2361 nt4.26□□□□□ -1.73
MSH2P25847 YCR108CYCR108C 192 nt4.26□□□□□ -1.73
MSH2P25847 DAD1YDR016C 285 nt4.26□□□□□ -1.73
MSH2P25847 POG1YIL122W 1056 nt4.26□□□□□ -1.73
MSH2P25847 RPA12YJR063W 378 nt4.26□□□□□ -1.73
MSH2P25847 YLL044WYLL044W 447 nt4.26□□□□□ -1.73
MSH2P25847 ERG2YMR202W 669 nt4.26□□□□□ -1.73
MSH2P25847 YOR131CYOR131C 657 nt4.26□□□□□ -1.73
MSH2P25847 RCN2YOR220W 798 nt4.26□□□□□ -1.73
MSH2P25847 IRC3YDR332W 2070 nt4.26□□□□□ -1.73
MSH2P25847 CAF130YGR134W 3369 nt4.26□□□□□ -1.73
MSH2P25847 MDM36YPR083W 1740 nt4.26□□□□□ -1.73
MSH2P25847 YDL228CYDL228C 642 nt4.25□□□□□ -1.73
MSH2P25847 YFL015CYFL015C 495 nt4.25□□□□□ -1.73
MSH2P25847 LRP1YHR081W 555 nt4.25□□□□□ -1.73
MSH2P25847 IME1YJR094C 1083 nt4.25□□□□□ -1.73
MSH2P25847 SRP21YKL122C 504 nt4.25□□□□□ -1.73
MSH2P25847 YLR400WYLR400W 474 nt4.25□□□□□ -1.73
MSH2P25847 GAL11YOL051W 3246 nt4.25□□□□□ -1.73
MSH2P25847 YPR059CYPR059C 387 nt4.25□□□□□ -1.73
MSH2P25847 FLO8YER109C 2400 nt4.25□□□□□ -1.73
MSH2P25847 ECM22YLR228C 2445 nt4.25□□□□□ -1.73
MSH2P25847 DUN1YDL101C 1542 nt4.25□□□□□ -1.73
MSH2P25847 LAS1YKR063C 1509 nt4.25□□□□□ -1.73
MSH2P25847 ITT1YML068W 1395 nt4.25□□□□□ -1.73
MSH2P25847 NOP12YOL041C 1380 nt4.25□□□□□ -1.73
MSH2P25847 HDA2YDR295C 2025 nt4.24□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 21.5 ms