Protein–RNA interactions for Protein: P12830

CDH1, Cadherin-1, humanhuman

Predictions only

Length 882 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1P12830 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH1P12830 AK1-201ENST00000223836 736 ntTSL 3 BASIC20.57■□□□□ 0.88
CDH1P12830 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH1P12830 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH1P12830 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CDH1P12830 AC027612.3-201ENST00000413684 1047 ntBASIC20.57■□□□□ 0.88
CDH1P12830 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH1P12830 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC20.57■□□□□ 0.88
CDH1P12830 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CDH1P12830 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC20.57■□□□□ 0.88
CDH1P12830 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.57■□□□□ 0.88
CDH1P12830 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC20.57■□□□□ 0.88
CDH1P12830 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH1P12830 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 SP2-202ENST00000613139 908 ntTSL 5 BASIC20.56■□□□□ 0.88
CDH1P12830 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
CDH1P12830 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.56■□□□□ 0.88
CDH1P12830 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CDH1P12830 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
CDH1P12830 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.55■□□□□ 0.88
CDH1P12830 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 AC055733.4-201ENST00000638462 1354 ntBASIC20.55■□□□□ 0.88
CDH1P12830 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.55■□□□□ 0.88
CDH1P12830 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CDH1P12830 GOLGA2P6-201ENST00000340929 2049 ntBASIC20.54■□□□□ 0.88
CDH1P12830 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
CDH1P12830 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC20.54■□□□□ 0.88
CDH1P12830 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
CDH1P12830 AC003102.1-202ENST00000563394 1796 ntBASIC20.54■□□□□ 0.88
CDH1P12830 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDH1P12830 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
CDH1P12830 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
CDH1P12830 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.54■□□□□ 0.88
CDH1P12830 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
CDH1P12830 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
CDH1P12830 AC005229.4-201ENST00000610085 2198 ntBASIC20.53■□□□□ 0.88
CDH1P12830 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH1P12830 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
CDH1P12830 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC20.53■□□□□ 0.88
CDH1P12830 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH1P12830 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC20.53■□□□□ 0.88
CDH1P12830 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
CDH1P12830 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDH1P12830 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
CDH1P12830 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
CDH1P12830 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC20.53■□□□□ 0.88
CDH1P12830 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH1P12830 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH1P12830 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH1P12830 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC20.52■□□□□ 0.88
CDH1P12830 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.52■□□□□ 0.88
CDH1P12830 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
CDH1P12830 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
CDH1P12830 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.52■□□□□ 0.87
CDH1P12830 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
CDH1P12830 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC20.52■□□□□ 0.87
CDH1P12830 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.52■□□□□ 0.87
CDH1P12830 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH1P12830 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CDH1P12830 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CDH1P12830 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH1P12830 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC20.51■□□□□ 0.87
CDH1P12830 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CDH1P12830 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms