Protein–RNA interactions for Protein: P0C2J3

TY2B-LR1, Transposon Ty2-LR1 Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,770 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2B-LR1P0C2J3 SCH9YHR205W 2475 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 GPB1YOR371C 2694 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 RPL27BYDR471W 411 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 DIT1YDR403W 1611 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 ECM29YHL030W 5607 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 YEL043WYEL043W 2871 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 FRE2YKL220C 2136 nt2.75□□□□□ -1.97
TY2B-LR1P0C2J3 GLO3YER122C 1482 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 HYP2YEL034W 474 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 YVH1YIR026C 1095 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 SSU72YNL222W 621 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 YAL026C-AYAL026C-A 438 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 TRM7YBR061C 933 nt2.74□□□□□ -1.97
TY2B-LR1P0C2J3 SLH1YGR271W 5904 nt2.73□□□□□ -1.97
TY2B-LR1P0C2J3 LYS9YNR050C 1341 nt2.73□□□□□ -1.97
TY2B-LR1P0C2J3 PCD1YLR151C 1023 nt2.73□□□□□ -1.97
TY2B-LR1P0C2J3 FAF1YIL019W 1041 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 MMM1YLL006W 1281 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 YOR238WYOR238W 912 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 RGA1YOR127W 3024 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 VHR2YER064C 1518 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 AML1YGR001C 747 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 TPT1YOL102C 693 nt2.72□□□□□ -1.97
TY2B-LR1P0C2J3 GRR1YJR090C 3456 nt2.71□□□□□ -1.97
TY2B-LR1P0C2J3 MSH6YDR097C 3729 nt2.71□□□□□ -1.97
TY2B-LR1P0C2J3 YSA1YBR111C 696 nt2.71□□□□□ -1.98
TY2B-LR1P0C2J3 STF2YGR008C 255 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 ORM1YGR038W 669 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 SWD2YKL018W 990 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 YLR154C-HYLR154C-H 132 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 YLR156C-AYLR156C-A 132 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 YLR157C-CYLR157C-C 132 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 YLR159C-AYLR159C-A 132 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 OST6YML019W 999 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 CUS2YNL286W 858 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 YOR392WYOR392W 444 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 ERT1YBR239C 1590 nt2.7□□□□□ -1.98
TY2B-LR1P0C2J3 NUM1YDR150W 8247 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 YBT1YLL048C 4986 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 PMT4YJR143C 2289 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 SGM1YJR134C 2124 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 VPS72YDR485C 2388 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 SNX41YDR425W 1878 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 YHC1YLR298C 696 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 SET6YPL165C 1122 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 YBR287WYBR287W 1284 nt2.69□□□□□ -1.98
TY2B-LR1P0C2J3 IOC3YFR013W 2364 nt2.68□□□□□ -1.98
TY2B-LR1P0C2J3 PIB1YDR313C 861 nt2.68□□□□□ -1.98
TY2B-LR1P0C2J3 TWF1YGR080W 999 nt2.68□□□□□ -1.98
TY2B-LR1P0C2J3 YLL047WYLL047W 384 nt2.68□□□□□ -1.98
TY2B-LR1P0C2J3 GCD7YLR291C 1146 nt2.68□□□□□ -1.98
TY2B-LR1P0C2J3 ADK1YDR226W 669 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 RTS3YGR161C 792 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 ERV29YGR284C 933 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 YIL046W-AYIL046W-A 165 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 MUD1YBR119W 897 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 THI22YPR121W 1719 nt2.67□□□□□ -1.98
TY2B-LR1P0C2J3 AIM39YOL053W 1188 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 UTP14YML093W 2700 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 SEC7YDR170C 6030 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 TRM732YMR259C 4263 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 ATG29YPL166W 642 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 RAD50YNL250W 3939 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 RKM3YBR030W 1659 nt2.66□□□□□ -1.98
TY2B-LR1P0C2J3 HEM4YOR278W 828 nt2.65□□□□□ -1.99
TY2B-LR1P0C2J3 BTS1YPL069C 1008 nt2.65□□□□□ -1.99
TY2B-LR1P0C2J3 MDM20YOL076W 2391 nt2.65□□□□□ -1.99
TY2B-LR1P0C2J3 KOG1YHR186C 4674 nt2.64□□□□□ -1.99
TY2B-LR1P0C2J3 SPC72YAL047C 1869 nt2.64□□□□□ -1.99
TY2B-LR1P0C2J3 DSL1YNL258C 2265 nt2.64□□□□□ -1.99
TY2B-LR1P0C2J3 YAR1YPL239W 603 nt2.64□□□□□ -1.99
TY2B-LR1P0C2J3 NCB2YDR397C 441 nt2.63□□□□□ -1.99
TY2B-LR1P0C2J3 YOS1YER074W-A 258 nt2.63□□□□□ -1.99
TY2B-LR1P0C2J3 COS4YFL062W 1140 nt2.63□□□□□ -1.99
TY2B-LR1P0C2J3 SAE2YGL175C 1038 nt2.63□□□□□ -1.99
TY2B-LR1P0C2J3 IMH1YLR309C 2736 nt2.62□□□□□ -1.99
TY2B-LR1P0C2J3 POL2YNL262W 6669 nt2.62□□□□□ -1.99
TY2B-LR1P0C2J3 YJL181WYJL181W 1836 nt2.62□□□□□ -1.99
TY2B-LR1P0C2J3 YKL075CYKL075C 1353 nt2.62□□□□□ -1.99
TY2B-LR1P0C2J3 SEC28YIL076W 891 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 PSD2YGR170W 3417 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 YMR306C-AYMR306C-A 390 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 HAT1YPL001W 1125 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 FAB1YFR019W 6837 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 LTE1YAL024C 4308 nt2.61□□□□□ -1.99
TY2B-LR1P0C2J3 YDL041WYDL041W 354 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 TVP15YDR100W 432 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 YPR077CYPR077C 372 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 YPR203WYPR203W 309 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 CHS1YNL192W 3396 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 UBP12YJL197W 3765 nt2.6□□□□□ -1.99
TY2B-LR1P0C2J3 VMA8YEL051W 771 nt2.59□□□□□ -1.99
TY2B-LR1P0C2J3 ECM13YBL043W 774 nt2.59□□□□□ -1.99
TY2B-LR1P0C2J3 SNU114YKL173W 3027 nt2.59□□□□□ -2
TY2B-LR1P0C2J3 VPS16YPL045W 2397 nt2.59□□□□□ -2
TY2B-LR1P0C2J3 PEX10YDR265W 1014 nt2.59□□□□□ -2
TY2B-LR1P0C2J3 ARA1YBR149W 1035 nt2.59□□□□□ -2
TY2B-LR1P0C2J3 BUD6YLR319C 2367 nt2.58□□□□□ -2
TY2B-LR1P0C2J3 IML1YJR138W 4755 nt2.58□□□□□ -2
TY2B-LR1P0C2J3 SHE4YOR035C 2370 nt2.58□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 24.6 ms