Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
COL5A2P05997 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
COL5A2P05997 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL5A2P05997 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC28.21■■■□□ 2.11
COL5A2P05997 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
COL5A2P05997 AC061975.6-201ENST00000579045 1553 ntBASIC28.21■■■□□ 2.11
COL5A2P05997 AC060766.5-201ENST00000590539 871 ntBASIC28.21■■■□□ 2.11
COL5A2P05997 MME-217ENST00000616757 1315 ntTSL 5 BASIC28.21■■■□□ 2.11
COL5A2P05997 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.21■■■□□ 2.11
COL5A2P05997 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
COL5A2P05997 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
COL5A2P05997 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC28.21■■■□□ 2.11
COL5A2P05997 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC28.21■■■□□ 2.11
COL5A2P05997 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC28.21■■■□□ 2.11
COL5A2P05997 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC28.2■■■□□ 2.11
COL5A2P05997 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC28.2■■■□□ 2.1
COL5A2P05997 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC28.2■■■□□ 2.1
COL5A2P05997 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC28.2■■■□□ 2.1
COL5A2P05997 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
COL5A2P05997 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC28.19■■■□□ 2.1
COL5A2P05997 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 LSM12P1-201ENST00000411836 588 ntBASIC28.19■■■□□ 2.1
COL5A2P05997 UBE2SP1-201ENST00000450587 669 ntBASIC28.19■■■□□ 2.1
COL5A2P05997 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 RNF121-214ENST00000533380 870 ntTSL 3 BASIC28.19■■■□□ 2.1
COL5A2P05997 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC28.19■■■□□ 2.1
COL5A2P05997 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC28.19■■■□□ 2.1
COL5A2P05997 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC28.19■■■□□ 2.1
COL5A2P05997 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
COL5A2P05997 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC28.19■■■□□ 2.1
COL5A2P05997 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC28.19■■■□□ 2.1
COL5A2P05997 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
COL5A2P05997 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC28.18■■■□□ 2.1
COL5A2P05997 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC28.18■■■□□ 2.1
COL5A2P05997 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
COL5A2P05997 AC137767.1-201ENST00000602918 1920 ntBASIC28.17■■■□□ 2.1
COL5A2P05997 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC28.17■■■□□ 2.1
COL5A2P05997 AL355472.2-201ENST00000422958 438 ntBASIC28.17■■■□□ 2.1
COL5A2P05997 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
COL5A2P05997 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC28.17■■■□□ 2.1
COL5A2P05997 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL5A2P05997 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL5A2P05997 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC28.17■■■□□ 2.1
COL5A2P05997 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC28.17■■■□□ 2.1
COL5A2P05997 AQP6-201ENST00000315520 1398 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL5A2P05997 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
COL5A2P05997 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
COL5A2P05997 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
COL5A2P05997 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC28.16■■■□□ 2.1
COL5A2P05997 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC28.16■■■□□ 2.1
COL5A2P05997 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL5A2P05997 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC28.16■■■□□ 2.1
COL5A2P05997 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC28.16■■■□□ 2.1
COL5A2P05997 RARG-204ENST00000543726 1779 ntTSL 2 BASIC28.16■■■□□ 2.1
COL5A2P05997 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
COL5A2P05997 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC28.15■■■□□ 2.1
COL5A2P05997 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC28.15■■■□□ 2.1
COL5A2P05997 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC28.15■■■□□ 2.1
COL5A2P05997 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL5A2P05997 NME6-213ENST00000451657 871 ntTSL 2 BASIC28.15■■■□□ 2.1
COL5A2P05997 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC28.15■■■□□ 2.1
COL5A2P05997 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
COL5A2P05997 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC28.15■■■□□ 2.1
COL5A2P05997 ID2-201ENST00000234091 2041 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL5A2P05997 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
COL5A2P05997 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
COL5A2P05997 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC28.14■■■□□ 2.09
COL5A2P05997 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL5A2P05997 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL5A2P05997 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC28.14■■■□□ 2.09
COL5A2P05997 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC28.14■■■□□ 2.09
COL5A2P05997 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC28.14■■■□□ 2.09
COL5A2P05997 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC28.14■■■□□ 2.09
COL5A2P05997 HLA-B-256ENST00000639848 1089 ntBASIC28.14■■■□□ 2.09
COL5A2P05997 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC28.14■■■□□ 2.09
COL5A2P05997 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC28.13■■■□□ 2.09
COL5A2P05997 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC28.13■■■□□ 2.09
COL5A2P05997 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC28.13■■■□□ 2.09
COL5A2P05997 FAM21FP-204ENST00000608637 956 ntBASIC28.13■■■□□ 2.09
COL5A2P05997 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
COL5A2P05997 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC28.12■■■□□ 2.09
COL5A2P05997 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
COL5A2P05997 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC28.12■■■□□ 2.09
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms