Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
KDM4BO94953 AL031602.1-201ENST00000633169 911 ntBASIC18.47■□□□□ 0.55
KDM4BO94953 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
KDM4BO94953 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.46■□□□□ 0.55
KDM4BO94953 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC18.46■□□□□ 0.55
KDM4BO94953 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
KDM4BO94953 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC18.46■□□□□ 0.55
KDM4BO94953 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC18.46■□□□□ 0.55
KDM4BO94953 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC18.46■□□□□ 0.55
KDM4BO94953 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC18.46■□□□□ 0.55
KDM4BO94953 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 AC026471.6-201ENST00000622954 1905 ntBASIC18.46■□□□□ 0.55
KDM4BO94953 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
KDM4BO94953 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
KDM4BO94953 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
KDM4BO94953 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KDM4BO94953 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
KDM4BO94953 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
KDM4BO94953 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 ADAMTS13-203ENST00000371910 1074 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 SRD5A1P1-201ENST00000442297 786 ntBASIC18.45■□□□□ 0.54
KDM4BO94953 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM4BO94953 AC092171.4-201ENST00000609130 632 ntBASIC18.45■□□□□ 0.54
KDM4BO94953 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
KDM4BO94953 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.45■□□□□ 0.54
KDM4BO94953 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
KDM4BO94953 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.45■□□□□ 0.54
KDM4BO94953 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
KDM4BO94953 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
KDM4BO94953 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
KDM4BO94953 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
KDM4BO94953 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.44■□□□□ 0.54
KDM4BO94953 AL512631.2-201ENST00000604634 923 ntBASIC18.44■□□□□ 0.54
KDM4BO94953 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.44■□□□□ 0.54
KDM4BO94953 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.44■□□□□ 0.54
KDM4BO94953 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KDM4BO94953 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
KDM4BO94953 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC18.43■□□□□ 0.54
KDM4BO94953 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 C2orf82-201ENST00000331342 465 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC18.43■□□□□ 0.54
KDM4BO94953 MIR3181-201ENST00000578512 73 ntBASIC18.43■□□□□ 0.54
KDM4BO94953 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
KDM4BO94953 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
KDM4BO94953 STX4-202ENST00000394998 1498 ntTSL 2 BASIC18.43■□□□□ 0.54
KDM4BO94953 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KDM4BO94953 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.43■□□□□ 0.54
KDM4BO94953 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
KDM4BO94953 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
KDM4BO94953 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.42■□□□□ 0.54
KDM4BO94953 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
KDM4BO94953 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
KDM4BO94953 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC18.42■□□□□ 0.54
KDM4BO94953 AL356441.2-201ENST00000443009 864 ntBASIC18.42■□□□□ 0.54
KDM4BO94953 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.42■□□□□ 0.54
KDM4BO94953 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms