Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
PDCD6O75340 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.83■□□□□ 0.44
PDCD6O75340 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.82■□□□□ 0.44
PDCD6O75340 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
PDCD6O75340 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.82■□□□□ 0.44
PDCD6O75340 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.82■□□□□ 0.44
PDCD6O75340 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.82■□□□□ 0.44
PDCD6O75340 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC17.82■□□□□ 0.44
PDCD6O75340 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
PDCD6O75340 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.82■□□□□ 0.44
PDCD6O75340 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
PDCD6O75340 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC17.81■□□□□ 0.44
PDCD6O75340 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.81■□□□□ 0.44
PDCD6O75340 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
PDCD6O75340 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
PDCD6O75340 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
PDCD6O75340 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC17.81■□□□□ 0.44
PDCD6O75340 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC17.8■□□□□ 0.44
PDCD6O75340 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC17.8■□□□□ 0.44
PDCD6O75340 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC17.8■□□□□ 0.44
PDCD6O75340 BX842568.3-201ENST00000418104 571 ntBASIC17.8■□□□□ 0.44
PDCD6O75340 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC17.8■□□□□ 0.44
PDCD6O75340 SMUG1P1-201ENST00000590640 811 ntBASIC17.8■□□□□ 0.44
PDCD6O75340 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC17.8■□□□□ 0.44
PDCD6O75340 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PDCD6O75340 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
PDCD6O75340 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17.79■□□□□ 0.44
PDCD6O75340 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC17.79■□□□□ 0.44
PDCD6O75340 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17.79■□□□□ 0.44
PDCD6O75340 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PDCD6O75340 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
PDCD6O75340 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.79■□□□□ 0.44
PDCD6O75340 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.79■□□□□ 0.44
PDCD6O75340 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PDCD6O75340 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC17.79■□□□□ 0.44
PDCD6O75340 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
PDCD6O75340 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
PDCD6O75340 LINC01521-201ENST00000504184 1943 ntBASIC17.78■□□□□ 0.44
PDCD6O75340 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
PDCD6O75340 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PDCD6O75340 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 12.7 ms