Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 AC024257.2-201ENST00000549699 147 ntBASIC20.04■□□□□ 0.8
SCN2BO60939 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.04■□□□□ 0.8
SCN2BO60939 AC233992.3-201ENST00000607491 485 ntBASIC20.04■□□□□ 0.8
SCN2BO60939 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
SCN2BO60939 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN2BO60939 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.04■□□□□ 0.8
SCN2BO60939 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
SCN2BO60939 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
SCN2BO60939 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 AL049796.1-201ENST00000565336 1766 ntBASIC20.03■□□□□ 0.8
SCN2BO60939 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
SCN2BO60939 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN2BO60939 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
SCN2BO60939 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 AC131212.1-201ENST00000613771 668 ntBASIC20.03■□□□□ 0.8
SCN2BO60939 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN2BO60939 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.03■□□□□ 0.8
SCN2BO60939 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
SCN2BO60939 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
SCN2BO60939 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN2BO60939 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN2BO60939 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20.02■□□□□ 0.8
SCN2BO60939 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN2BO60939 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC20.02■□□□□ 0.8
SCN2BO60939 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SCN2BO60939 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCN2BO60939 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SCN2BO60939 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SCN2BO60939 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 ASL-203ENST00000380839 1765 ntTSL 5 BASIC20.01■□□□□ 0.79
SCN2BO60939 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN2BO60939 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SCN2BO60939 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
SCN2BO60939 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC20.01■□□□□ 0.79
SCN2BO60939 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC20.01■□□□□ 0.79
SCN2BO60939 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SCN2BO60939 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SCN2BO60939 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SCN2BO60939 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN2BO60939 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20■□□□□ 0.79
SCN2BO60939 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC20■□□□□ 0.79
SCN2BO60939 AL136162.1-201ENST00000607711 1078 ntBASIC20■□□□□ 0.79
SCN2BO60939 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SCN2BO60939 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN2BO60939 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN2BO60939 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN2BO60939 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN2BO60939 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC19.99■□□□□ 0.79
SCN2BO60939 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC19.99■□□□□ 0.79
SCN2BO60939 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.99■□□□□ 0.79
SCN2BO60939 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SCN2BO60939 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SCN2BO60939 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.98■□□□□ 0.79
SCN2BO60939 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms