Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNT1O60563 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNT1O60563 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC24.07■■□□□ 1.44
CCNT1O60563 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC24.07■■□□□ 1.44
CCNT1O60563 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC24.07■■□□□ 1.44
CCNT1O60563 AC004854.2-201ENST00000608450 1441 ntBASIC24.07■■□□□ 1.44
CCNT1O60563 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC24.07■■□□□ 1.44
CCNT1O60563 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCNT1O60563 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC24.07■■□□□ 1.44
CCNT1O60563 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.06■■□□□ 1.44
CCNT1O60563 EEF1DP3-203ENST00000566025 782 ntBASIC24.06■■□□□ 1.44
CCNT1O60563 MIR5787-201ENST00000611784 55 ntBASIC24.06■■□□□ 1.44
CCNT1O60563 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.06■■□□□ 1.44
CCNT1O60563 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC24.06■■□□□ 1.44
CCNT1O60563 MFF-203ENST00000349901 1716 ntTSL 2 BASIC24.06■■□□□ 1.44
CCNT1O60563 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 AP004607.4-201ENST00000530158 1459 ntBASIC24.06■■□□□ 1.44
CCNT1O60563 TUB-203ENST00000534099 1759 ntTSL 2 BASIC24.06■■□□□ 1.44
CCNT1O60563 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCNT1O60563 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
CCNT1O60563 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.05■■□□□ 1.44
CCNT1O60563 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.05■■□□□ 1.44
CCNT1O60563 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.05■■□□□ 1.44
CCNT1O60563 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCNT1O60563 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.04■■□□□ 1.44
CCNT1O60563 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.04■■□□□ 1.44
CCNT1O60563 RNF146-206ENST00000480444 843 ntTSL 2 BASIC24.04■■□□□ 1.44
CCNT1O60563 TESC-206ENST00000541210 936 ntTSL 3 BASIC24.04■■□□□ 1.44
CCNT1O60563 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC24.04■■□□□ 1.44
CCNT1O60563 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC24.04■■□□□ 1.44
CCNT1O60563 KRT18P61-201ENST00000585825 1298 ntBASIC24.04■■□□□ 1.44
CCNT1O60563 NTF6G-201ENST00000591094 616 ntBASIC24.04■■□□□ 1.44
CCNT1O60563 AC053503.5-201ENST00000601508 636 ntBASIC24.04■■□□□ 1.44
CCNT1O60563 AC104187.1-201ENST00000607510 612 ntBASIC24.04■■□□□ 1.44
CCNT1O60563 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.04■■□□□ 1.44
CCNT1O60563 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.04■■□□□ 1.44
CCNT1O60563 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 SKI-201ENST00000378536 5613 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
CCNT1O60563 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 RARG-204ENST00000543726 1779 ntTSL 2 BASIC24.03■■□□□ 1.44
CCNT1O60563 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.03■■□□□ 1.44
CCNT1O60563 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
CCNT1O60563 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC24.03■■□□□ 1.44
CCNT1O60563 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.03■■□□□ 1.44
CCNT1O60563 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.03■■□□□ 1.44
CCNT1O60563 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.03■■□□□ 1.44
CCNT1O60563 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.03■■□□□ 1.44
CCNT1O60563 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.02■■□□□ 1.44
CCNT1O60563 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 GALNS-213ENST00000569433 723 ntTSL 3 BASIC24.02■■□□□ 1.44
CCNT1O60563 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
CCNT1O60563 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.02■■□□□ 1.44
CCNT1O60563 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC24.02■■□□□ 1.44
CCNT1O60563 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
CCNT1O60563 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
CCNT1O60563 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC24.01■■□□□ 1.43
CCNT1O60563 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC24.01■■□□□ 1.43
CCNT1O60563 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.01■■□□□ 1.43
CCNT1O60563 KRT18P5-201ENST00000436075 1291 ntBASIC24.01■■□□□ 1.43
CCNT1O60563 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CCNT1O60563 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms