Protein–RNA interactions for Protein: O43633

CHMP2A, Charged multivesicular body protein 2a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2AO43633 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHMP2AO43633 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CHMP2AO43633 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 AC138907.5-202ENST00000569484 235 ntBASIC23.82■■□□□ 1.4
CHMP2AO43633 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 WWOX-218ENST00000627394 894 ntTSL 5 BASIC23.82■■□□□ 1.4
CHMP2AO43633 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
CHMP2AO43633 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
CHMP2AO43633 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC23.82■■□□□ 1.4
CHMP2AO43633 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC23.81■■□□□ 1.4
CHMP2AO43633 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.81■■□□□ 1.4
CHMP2AO43633 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
CHMP2AO43633 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.81■■□□□ 1.4
CHMP2AO43633 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CHMP2AO43633 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 NAA20-201ENST00000310450 920 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP2AO43633 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
CHMP2AO43633 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC23.8■■□□□ 1.4
CHMP2AO43633 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP2AO43633 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 RARG-204ENST00000543726 1779 ntTSL 2 BASIC23.8■■□□□ 1.4
CHMP2AO43633 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
CHMP2AO43633 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC23.79■■□□□ 1.4
CHMP2AO43633 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC23.79■■□□□ 1.4
CHMP2AO43633 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP2AO43633 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP2AO43633 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC23.79■■□□□ 1.4
CHMP2AO43633 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC23.79■■□□□ 1.4
CHMP2AO43633 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 MFSD14C-208ENST00000637864 1802 ntAPPRIS ALT2 TSL 2 BASIC23.79■■□□□ 1.4
CHMP2AO43633 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CHMP2AO43633 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CHMP2AO43633 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC23.78■■□□□ 1.4
CHMP2AO43633 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC23.78■■□□□ 1.4
CHMP2AO43633 PARP1-202ENST00000366792 553 ntTSL 3 BASIC23.78■■□□□ 1.4
CHMP2AO43633 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC23.78■■□□□ 1.4
CHMP2AO43633 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CHMP2AO43633 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
CHMP2AO43633 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP2AO43633 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC23.77■■□□□ 1.4
CHMP2AO43633 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.77■■□□□ 1.4
CHMP2AO43633 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP2AO43633 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC23.77■■□□□ 1.4
CHMP2AO43633 BID-214ENST00000617586 542 ntTSL 5 BASIC23.77■■□□□ 1.4
CHMP2AO43633 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CHMP2AO43633 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CHMP2AO43633 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2AO43633 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHMP2AO43633 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2AO43633 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
CHMP2AO43633 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2AO43633 SLC7A5P2-201ENST00000553010 536 ntBASIC23.76■■□□□ 1.39
CHMP2AO43633 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC23.76■■□□□ 1.39
CHMP2AO43633 VPS53-216ENST00000574029 585 ntTSL 4 BASIC23.76■■□□□ 1.39
CHMP2AO43633 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.76■■□□□ 1.39
CHMP2AO43633 AC011767.1-201ENST00000617410 1153 ntBASIC23.76■■□□□ 1.39
CHMP2AO43633 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
CHMP2AO43633 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC23.76■■□□□ 1.39
CHMP2AO43633 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2AO43633 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CHMP2AO43633 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2AO43633 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
CHMP2AO43633 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2AO43633 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2AO43633 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CHMP2AO43633 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms