Protein–RNA interactions for Protein: O15111

CHUK, Inhibitor of nuclear factor kappa-B kinase subunit alpha, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHUKO15111 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC21.65■■□□□ 1.06
CHUKO15111 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.65■■□□□ 1.06
CHUKO15111 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
CHUKO15111 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
CHUKO15111 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
CHUKO15111 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHUKO15111 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
CHUKO15111 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC21.64■■□□□ 1.05
CHUKO15111 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.64■■□□□ 1.05
CHUKO15111 AC068587.7-201ENST00000641602 218 ntBASIC21.64■■□□□ 1.05
CHUKO15111 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
CHUKO15111 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.64■■□□□ 1.05
CHUKO15111 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHUKO15111 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC21.63■■□□□ 1.05
CHUKO15111 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.63■■□□□ 1.05
CHUKO15111 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC21.63■■□□□ 1.05
CHUKO15111 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC21.63■■□□□ 1.05
CHUKO15111 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
CHUKO15111 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHUKO15111 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.63■■□□□ 1.05
CHUKO15111 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
CHUKO15111 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHUKO15111 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
CHUKO15111 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC21.62■■□□□ 1.05
CHUKO15111 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.62■■□□□ 1.05
CHUKO15111 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 TSPY26P-201ENST00000476365 1326 ntBASIC21.62■■□□□ 1.05
CHUKO15111 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.62■■□□□ 1.05
CHUKO15111 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.62■■□□□ 1.05
CHUKO15111 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
CHUKO15111 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
CHUKO15111 FAM99A-202ENST00000538190 1989 ntBASIC21.61■■□□□ 1.05
CHUKO15111 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC21.61■■□□□ 1.05
CHUKO15111 EI24-211ENST00000534546 1544 ntTSL 2 BASIC21.61■■□□□ 1.05
CHUKO15111 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
CHUKO15111 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC21.61■■□□□ 1.05
CHUKO15111 RHOF-204ENST00000537265 699 ntTSL 2 BASIC21.61■■□□□ 1.05
CHUKO15111 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHUKO15111 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC21.61■■□□□ 1.05
CHUKO15111 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CHUKO15111 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CHUKO15111 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 ZPBP2-201ENST00000348931 1543 ntAPPRIS P4 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.6■■□□□ 1.05
CHUKO15111 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC21.6■■□□□ 1.05
CHUKO15111 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.6■■□□□ 1.05
CHUKO15111 IRS3P-201ENST00000223076 1006 ntBASIC21.6■■□□□ 1.05
CHUKO15111 POLR3GL-201ENST00000369313 818 ntTSL 2 BASIC21.6■■□□□ 1.05
CHUKO15111 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC21.6■■□□□ 1.05
CHUKO15111 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CHUKO15111 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHUKO15111 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.59■■□□□ 1.05
CHUKO15111 C7orf25-203ENST00000431882 1645 ntTSL 2 BASIC21.59■■□□□ 1.05
CHUKO15111 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHUKO15111 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHUKO15111 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.59■■□□□ 1.05
CHUKO15111 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHUKO15111 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
CHUKO15111 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CHUKO15111 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.59■■□□□ 1.05
CHUKO15111 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC21.59■■□□□ 1.05
CHUKO15111 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CHUKO15111 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC21.58■■□□□ 1.05
CHUKO15111 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CHUKO15111 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC21.58■■□□□ 1.05
CHUKO15111 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC21.58■■□□□ 1.05
CHUKO15111 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
CHUKO15111 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CHUKO15111 AC080038.3-201ENST00000623346 1952 ntBASIC21.57■■□□□ 1.04
CHUKO15111 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC21.57■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 12.8 ms