Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 NARF-205ENST00000412079 1760 ntTSL 5 BASIC20.72■□□□□ 0.91
EIF3FO00303 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3FO00303 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3FO00303 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
EIF3FO00303 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
EIF3FO00303 AC053503.5-201ENST00000601508 636 ntBASIC20.72■□□□□ 0.91
EIF3FO00303 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
EIF3FO00303 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3FO00303 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3FO00303 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3FO00303 PARN-205ENST00000539279 1557 ntTSL 2 BASIC20.72■□□□□ 0.91
EIF3FO00303 LINC02228-203ENST00000641970 1355 ntBASIC20.72■□□□□ 0.91
EIF3FO00303 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
EIF3FO00303 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 SDHAP3-201ENST00000436493 736 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 RNF146-206ENST00000480444 843 ntTSL 2 BASIC20.71■□□□□ 0.91
EIF3FO00303 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
EIF3FO00303 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.91
EIF3FO00303 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
EIF3FO00303 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 JTB-203ENST00000368589 1216 ntTSL 2 BASIC20.7■□□□□ 0.9
EIF3FO00303 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
EIF3FO00303 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 TUNAR-203ENST00000554321 767 ntAPPRIS P1 TSL 4 BASIC20.7■□□□□ 0.9
EIF3FO00303 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.7■□□□□ 0.9
EIF3FO00303 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
EIF3FO00303 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
EIF3FO00303 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.69■□□□□ 0.9
EIF3FO00303 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.69■□□□□ 0.9
EIF3FO00303 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 YBX1P1-201ENST00000445822 960 ntBASIC20.69■□□□□ 0.9
EIF3FO00303 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3FO00303 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3FO00303 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.69■□□□□ 0.9
EIF3FO00303 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC20.69■□□□□ 0.9
EIF3FO00303 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3FO00303 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3FO00303 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.69■□□□□ 0.9
EIF3FO00303 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
EIF3FO00303 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
EIF3FO00303 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC20.68■□□□□ 0.9
EIF3FO00303 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 AC079140.4-201ENST00000507448 529 ntBASIC20.68■□□□□ 0.9
EIF3FO00303 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC20.68■□□□□ 0.9
EIF3FO00303 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC20.68■□□□□ 0.9
EIF3FO00303 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 KRT87P-202ENST00000534226 1464 ntBASIC20.68■□□□□ 0.9
EIF3FO00303 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
EIF3FO00303 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
EIF3FO00303 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.67■□□□□ 0.9
EIF3FO00303 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.67■□□□□ 0.9
EIF3FO00303 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 AC007375.3-201ENST00000600936 2314 ntBASIC20.67■□□□□ 0.9
EIF3FO00303 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
EIF3FO00303 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.67■□□□□ 0.9
EIF3FO00303 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.67■□□□□ 0.9
EIF3FO00303 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
EIF3FO00303 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3FO00303 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3FO00303 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3FO00303 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3FO00303 FEM1AP4-201ENST00000443167 1987 ntBASIC20.66■□□□□ 0.9
EIF3FO00303 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC20.66■□□□□ 0.9
EIF3FO00303 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
EIF3FO00303 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC20.66■□□□□ 0.9
EIF3FO00303 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3FO00303 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3FO00303 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3FO00303 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3FO00303 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC20.65■□□□□ 0.9
EIF3FO00303 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3FO00303 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC20.65■□□□□ 0.9
EIF3FO00303 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.65■□□□□ 0.9
EIF3FO00303 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EIF3FO00303 ZNRF2P3-201ENST00000424200 374 ntBASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 18.8 ms