Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
SRRM4A7MD48 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 AC009237.3-201ENST00000393279 1427 ntBASIC17.03■□□□□ 0.32
SRRM4A7MD48 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SRRM4A7MD48 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 AC055733.4-201ENST00000638462 1354 ntBASIC17.02■□□□□ 0.32
SRRM4A7MD48 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC17.02■□□□□ 0.32
SRRM4A7MD48 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SRRM4A7MD48 MIR572-201ENST00000384983 95 ntBASIC17.02■□□□□ 0.32
SRRM4A7MD48 AC091305.1-201ENST00000479476 895 ntBASIC17.02■□□□□ 0.32
SRRM4A7MD48 SUDS3P1-201ENST00000505831 966 ntBASIC17.02■□□□□ 0.32
SRRM4A7MD48 AL139246.5-201ENST00000606645 996 ntBASIC17.02■□□□□ 0.32
SRRM4A7MD48 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC17.02■□□□□ 0.31
SRRM4A7MD48 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 PKD1P6-201ENST00000343738 4769 ntBASIC17.01■□□□□ 0.31
SRRM4A7MD48 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
SRRM4A7MD48 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SRRM4A7MD48 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC17■□□□□ 0.31
SRRM4A7MD48 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
SRRM4A7MD48 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 BX005040.4-201ENST00000637145 1518 ntBASIC17■□□□□ 0.31
SRRM4A7MD48 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC17■□□□□ 0.31
SRRM4A7MD48 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC17■□□□□ 0.31
SRRM4A7MD48 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC17■□□□□ 0.31
SRRM4A7MD48 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 AC005224.4-201ENST00000583262 1652 ntBASIC16.99■□□□□ 0.31
SRRM4A7MD48 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
SRRM4A7MD48 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC16.99■□□□□ 0.31
SRRM4A7MD48 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
SRRM4A7MD48 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
SRRM4A7MD48 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 EBPL-204ENST00000378272 766 ntTSL 3 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC16.98■□□□□ 0.31
SRRM4A7MD48 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms