Protein–RNA interactions for Protein: A6NKQ9

CGB1, Choriogonadotropin subunit beta variant 1, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CGB1A6NKQ9 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC16.89■□□□□ 0.29
CGB1A6NKQ9 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 PBX2P1-201ENST00000493219 1291 ntBASIC16.88■□□□□ 0.29
CGB1A6NKQ9 NDUFS3-206ENST00000528192 561 ntTSL 5 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 AC008764.7-201ENST00000593779 1081 ntBASIC16.88■□□□□ 0.29
CGB1A6NKQ9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
CGB1A6NKQ9 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 PXK-203ENST00000383715 1756 ntTSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 AC099791.1-201ENST00000416440 715 ntBASIC16.87■□□□□ 0.29
CGB1A6NKQ9 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 AC106739.1-201ENST00000617035 715 ntBASIC16.87■□□□□ 0.29
CGB1A6NKQ9 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
CGB1A6NKQ9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 AC110285.6-201ENST00000617652 491 ntBASIC16.86■□□□□ 0.29
CGB1A6NKQ9 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
CGB1A6NKQ9 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 AP001330.3-201ENST00000520123 633 ntBASIC16.85■□□□□ 0.29
CGB1A6NKQ9 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 MAG-206ENST00000597035 542 ntTSL 4 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 GRAMD4P4-201ENST00000613563 1115 ntBASIC16.85■□□□□ 0.29
CGB1A6NKQ9 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
CGB1A6NKQ9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 SSPN-204ENST00000535504 419 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CGB1A6NKQ9 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms