Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TCRBV3S1A0A5B6 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV3S1A0A5B6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.83■□□□□ 0.77
TCRBV3S1A0A5B6 AC027702.1-201ENST00000563810 1770 ntBASIC19.83■□□□□ 0.77
TCRBV3S1A0A5B6 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TCRBV3S1A0A5B6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.83■□□□□ 0.77
TCRBV3S1A0A5B6 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.83■□□□□ 0.76
TCRBV3S1A0A5B6 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC19.83■□□□□ 0.76
TCRBV3S1A0A5B6 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TCRBV3S1A0A5B6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.83■□□□□ 0.76
TCRBV3S1A0A5B6 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 GTSE1-AS1-202ENST00000623117 1518 ntBASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 PCDHAC2-203ENST00000615316 3011 ntBASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 HSD17B1P1-201ENST00000590052 955 ntBASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TCRBV3S1A0A5B6 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TCRBV3S1A0A5B6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 AL451085.2-201ENST00000605085 799 ntBASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
TCRBV3S1A0A5B6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 ABHD17AP5-201ENST00000580133 923 ntBASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 AC068587.7-201ENST00000641602 218 ntBASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 AC133637.1-201ENST00000624115 1537 ntBASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.79■□□□□ 0.76
TCRBV3S1A0A5B6 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TCRBV3S1A0A5B6 AC020907.5-201ENST00000624372 1936 ntBASIC19.78■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms