Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC18.61■□□□□ 0.57
TRDV1A0A1B0GX56 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 AC021242.3-201ENST00000607598 1377 ntBASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 TK2-216ENST00000564917 1156 ntTSL 3 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRDV1A0A1B0GX56 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 ME2-218ENST00000640965 2476 ntTSL 5 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 AFG3L1P-217ENST00000557444 2447 ntBASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 PLK5-205ENST00000642079 1969 ntBASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
TRDV1A0A1B0GX56 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRDV1A0A1B0GX56 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.57
TRDV1A0A1B0GX56 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
TRDV1A0A1B0GX56 AC103724.3-201ENST00000564481 992 ntBASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
TRDV1A0A1B0GX56 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 AC103834.1-201ENST00000520383 144 ntBASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 AC068587.7-201ENST00000641602 218 ntBASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 AL391422.3-201ENST00000603791 2761 ntBASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.57■□□□□ 0.56
TRDV1A0A1B0GX56 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 AC003102.1-202ENST00000563394 1796 ntBASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC18.56■□□□□ 0.56
TRDV1A0A1B0GX56 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.55■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms